Panicum virgatum (switchgrass): 120647339
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Entry
120647339 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120647339
KO
K00599
tRNA N(3)-methylcytidine methyltransferase METTL6 [EC:2.1.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvir03016
]
120647339
Transfer RNA biogenesis [BR:
pvir03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120647339
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_12
Methyltransf_25
Methyltransf_31
Methyltransf_23
Methyltransf_16
Methyltransf_11
MTS
Methyltransf_2
Ubie_methyltran
PrmA
CMAS
Methyltransf_4
Herpes_UL74
Cons_hypoth95
Motif
Other DBs
NCBI-GeneID:
120647339
NCBI-ProteinID:
XP_039780039
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All DBs
Position
9K:67837970..67843197
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AA seq
589 aa
AA seq
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SHCRQSPRDESTRQTAAAAAASPRSGRFEASAMAAGEQQPQLGATRVSSSSSTGSGRLVT
PFWKEKYERDARRYWDIFYKRHEDKFFKDRHYLDKEWGKYFEGQDGEKMVLLEVGCGAGN
TIFPLLSTFPDIFVHACDFSPRAVDLVKKHKDFRPDRLNAFVCDITSEQLTENMEPSSAD
IVTMIFVLSAVAPDKMPLVLQNVRSVLKHGGRVLFRDYAFGDLAQERLMSKGQQISGNFY
VRGDGTRAYYFSNEYLVDLFSKCGFTLEEICVHNKQVENRSLDLVMNRNWIQATFTLDSS
DSQSLNGQHDLHVCEGKENKLVADSSKNKSSNEEIDLSEDFCNMFGTSHNLNEVQIIAIK
AKGHDFKIKMLTKEYQHTCKLTGLMLWESAQLMCSLLAENPSIVAGKRVLELGCGSAGIC
SMVAASSAQFVVATDGDAESLDLLRQNISSNLEPNLLNRIMIRKLFWGNKDDLREVRKLS
GNDTGFDCIIGTDVTYNPDAVLPLFKTARELISDKANEDARAAFILSYIQRRVDENSILS
NAMAQGFRLVDKWINGVHDSNGIISSWFSGNDVCSAYRNTTLSILYFEL
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
agtcactgtcgccaaagcccccgcgacgagtcgacccggcagaccgccgccgccgccgcc
gcctctcctcgttccggccgatttgaagcgagcgccatggccgcgggagagcagcagccg
caactcggcgccacgcgggtctcctcgtcgtcctccaccggctcggggaggctcgtcact
cccttctggaaagagaagtacgagagggatgcgaggaggtactgggacatcttctacaag
cgccacgaggacaagttcttcaaagatcgacactacctggataaagaatgggggaaatat
tttgagggacaagatggagagaagatggtgctgttagaggttggttgtggagctggaaac
acaatctttccattgctgtccacatttcctgatatatttgttcatgcctgtgatttttct
ccacgagctgttgacttggtcaagaagcacaaggacttcagacctgaccggttaaatgca
tttgtttgtgatattacatcagaacaactaactgagaacatggaaccttcttctgctgat
attgtaacaatgatatttgtgctctctgcagttgcaccagataaaatgcctttagttctg
cagaacgttagaagtgtcctaaagcatggtggccgtgttctctttcgggactatgccttt
ggggaccttgcacaggaaaggcttatgtcaaaaggccagcaaataagtgggaacttctat
gtcagaggtgatggtacgcgtgcatattacttttcaaatgaatatctagtcgacttattc
tcaaaatgtggatttactcttgaggaaatatgtgtgcacaacaagcaagttgagaaccgt
tcacttgacttggtgatgaacaggaattggatccaagctacctttaccctcgattcatct
gattctcaaagtctgaatggtcaacatgacctccacgtgtgtgaaggaaaagagaataag
ctagttgctgactcttctaagaataaaagtagtaatgaagaaattgatctttctgaggat
ttctgcaacatgtttgggacatcacacaaccttaatgaggtacaaatcattgcaatcaaa
gcaaaaggtcacgacttcaaaataaaaatgctcacgaaggaataccagcacacatgcaaa
ttaactggcttgatgctttgggaatcagctcaactcatgtgcagtctgttagcagagaat
ccttccattgttgcaggcaaaagggtcctggagctgggctgtggttcggctggcatctgc
tcaatggttgcagcaagttccgctcagtttgttgtagctacagatggggatgcagaatca
ctggacctccttagacagaatatctcttcaaatttggagcctaatttgctcaacagaatt
atgattaggaagttattttggggtaacaaagatgatttgagggaggtcagaaagctttct
ggcaatgacacaggttttgactgcataataggcaccgacgtgacctacaatccagatgct
gtacttcctctcttcaagactgccagagaactcatttctgacaaagctaatgaggatgca
agggcagcttttattcttagctacattcagcgccgtgttgatgagaattctatcctttct
aatgcaatggctcagggtttcaggcttgtggacaaatggataaatggagttcatgacagt
aatggtattattagctcttggttctctggtaatgatgtttgcagcgcttaccgaaacaca
acactttcaatattgtattttgaattgtga
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