Panicum virgatum (switchgrass): 120650934
Help
Entry
120650934 CDS
T07260
Name
(RefSeq) L-type lectin-domain containing receptor kinase SIT2-like
Organism
pvir
Panicum virgatum (switchgrass)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lectin_legB
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pkinase_fungal
Motif
Other DBs
NCBI-GeneID:
120650934
NCBI-ProteinID:
XP_039784178
LinkDB
All DBs
Position
9K:complement(24892926..24895388)
Genome browser
AA seq
699 aa
AA seq
DB search
MLASLSFLVLLVCHFHGLSHAAVPAAAGGGDGQFIYNGFAGAGLDLDGMAVVDPDGKLML
TNVTSQLKGHAFHPAPLRFHDKAPAPVSTQNRTARSFSTTFVFAIAAEYVTVSGNGLAFF
VAPSKNLSAASPSQFLGLFNNKNNGNASNHIFAVELDTILNPEFRDINSNHVGVDVNGLV
SVAAKPAGYYADDDTGVFKNLSLYSGDAMQVWVDYDGRATLLNVTLAPAEAAKPRKPLIS
VAVDLSAVVNDTAYVGLSSSTGPFRTRHYVLGWSFALDGAAPMLDYAKLPRMPRRAVAKR
RSRALDVALPVAVPLLALAAVACVSLLAWRRFRYAELREDWEVEFGPHRFAYKDLFRATG
GFDDGEHLLGVGGFGRVYKGVLPESGTEVAVKVVSHSHDARQGMRQFVSEVASIGRLRHR
NIVQLLGYCRRRGELLLVYDYMPNGSLDRWLHGGRGAPPLSWERRLRAIRGVAAGLLYLH
EDWEQVVIHRDVKASNVLLDAEMNARLGDFGLARLYERGAGAQTTHVVGTMGYLAPELAR
TRRVTPATDVFAFGAFVLEVVCGRRPIERGGGGGDDDDGRLVLLVDRVLELCHAGALADA
ADARLRGEYPAEEAALVLKLGLLCSHPVPGERPSMRQVVQYLDGDAPLPSPPRSYQSFTA
LAMMQNEGFDLYAASYPSSSATGTSVGAVSSVLTPKEGD
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccagcctatccttccttgtcctgctcgtctgccatttccatggcctcagccac
gcggcggtgccagcagccgccggcggcggtgacggccagttcatctacaacggcttcgcc
ggcgcggggctcgacctggacggcatggccgtggtcgacccggacggcaagctcatgctc
accaacgtcacatcccagctgaagggccacgcgttccacccggcgccgctccgcttccac
gacaaggcgccggcgccggtgtcgacgcagaacagaaccgcccggtcgttctcgacgacc
ttcgtgttcgccatcgccgccgagtacgtgacggtgagcggcaacgggctggccttcttc
gtcgcgccgagcaagaacctgtccgcggcgtcgccgagccagttcctcggcctcttcaac
aacaagaacaacggcaacgcgagcaaccacatcttcgccgtcgagctcgacaccatcctc
aacccggagttccgggacatcaacagcaaccatgtcggcgttgacgtcaacgggctggtg
tccgtcgccgccaagcccgccggttactacgccgacgacgacaccggtgtcttcaagaac
ctgtctctgtacagcggcgacgcgatgcaggtgtgggtggactacgacggccgggccacg
ctgctcaacgtcacgctcgcgcccgcggaggcggccaagccccggaagcccctgatctcc
gtcgccgtcgacctctcggcggtggtgaacgacacggcgtacgtcgggctctcgtcgtcg
acgggcccgttccgcacgcgccactacgtcctcggctggagcttcgccctggacggcgcc
gcgccgatgctcgactacgcgaagctccccaggatgcctcgccgcgccgtcgccaaacgt
cggtccagggcgctcgatgtggcgctgccggtcgccgtgccgctccttgcgctcgcggcg
gtggcctgcgtgtccctcctcgcgtggcggcggttccggtacgccgagctccgggaggac
tgggaggtggagttcggcccgcaccggttcgcgtacaaggacctcttccgcgccaccggc
ggcttcgacgacggcgagcacctcctcggcgtcggaggcttcggccgcgtgtacaagggc
gtgctcccggagtccgggaccgaggtcgccgtcaaggtcgtgtcgcactcgcacgacgcg
aggcaggggatgaggcagttcgtctccgaggtcgccagcatcggccgcctccggcaccgc
aacatcgtgcagctgctcggctactgccggcggcggggcgagctcctcctggtgtacgac
tacatgcccaacggcagcctggacaggtggctgcacggcggccgcggcgcgccgccgctg
agctgggagcggaggctccgcgccatcaggggcgtcgcggcgggcctgctctacctccac
gaggactgggagcaggtggtcatccaccgcgacgtcaaggccagcaacgtgctcctcgac
gccgagatgaacgcccggctcggcgacttcgggctcgcgcggctgtacgagcgcggcgcc
ggcgcgcagaccacgcacgtggtgggcaccatggggtacctcgcgccggagctcgcgcgc
acccggcgcgtcacgccggccaccgacgtgttcgcgttcggcgcgttcgtgctcgaggtg
gtgtgcggccggcggcccatcgagcgcggcggcggcggcggcgacgacgacgacgggcgg
ctcgtgctgctggtggaccgggtgctggagctctgtcacgcgggcgcgctcgccgacgcc
gcggacgcgcggctccgcggcgagtaccccgcggaggaggccgcgctggtactgaagctg
ggcctgctgtgctcccacccggtgcccggcgagcggccgtcgatgcggcaggtggtgcag
tacctcgacggcgacgcgccgctgccctcgccgccgcggtcgtatcagagcttcaccgca
ctggccatgatgcagaacgagggcttcgacttgtacgccgcgtcgtacccgtcgtcgtcg
gctactgggacaagcgtgggcgccgtgtcctctgtgctcactccgaaggaaggtgattag
DBGET
integrated database retrieval system
