Panicum virgatum (switchgrass): 120652917
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Entry
120652917 CDS
T07260
Name
(RefSeq) josephin-like protein
KO
K15235
josephin [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120652917
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120652917
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120652917
Peptidases and inhibitors [BR:
pvir01002
]
Cysteine peptidases
Family C86
120652917
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MJD
120652917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Josephin
Wzt_C
Motif
Other DBs
NCBI-GeneID:
120652917
NCBI-ProteinID:
XP_039786802
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All DBs
Position
9K:59983727..59986112
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AA seq
201 aa
AA seq
DB search
MEPGAKSEAKQGEAGSGAAGGGGGSSGSKVYHERQRLQFCLLHALNNLMQEKECFTRAEL
DRIAGNLVLSDPNKDQWTPLSFIFRPHHNVLTGNYDVNVLITALEARKKKVVWHDRRKGA
SSIDLDGEALVGLMINLPIRRFGGLWTGRHWVAIRSIDGVWFNLDSDLSEPKKFKDKENV
IAFLDSSLNQGGELMVVLQDE
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggagccaaatcagaagcgaagcaaggtgaggcgggatccggcgcggcggga
ggcggcggcggcagcagcggcagcaaggtgtatcacgagaggcagaggctgcagttctgc
ctgctccacgccctaaacaacctgatgcaggaaaaggaatgttttacccgagctgagttg
gacaggattgctggaaatcttgttcttagtgatccaaacaaggaccaatggactcctcta
tctttcatttttagacctcaccacaatgtgctaactgggaactatgatgtaaatgttctc
attacggcgttagaagctagaaaaaagaaggtggtttggcatgatcgtcgaaaaggggca
tcatcaatcgatttggatggagaagcgttggtgggtcttatgatcaatttgccaatcagg
aggttcggtggcctctggactggcaggcattgggtagcgattcgaagcattgatggtgtc
tggtttaatttggatagtgatctttctgaacctaagaagtttaaggacaaagaaaatgtg
attgcattccttgatagctcacttaatcaaggtggagaactcatggttgtgctgcaagat
gaataa
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