Panicum virgatum (switchgrass): 120654917
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Entry
120654917 CDS
T07260
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120654917
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120654917
04147 Exosome [BR:
pvir04147
]
120654917
04090 CD molecules [BR:
pvir04090
]
120654917
Enzymes [BR:
pvir01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120654917
Transporters [BR:
pvir02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120654917
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120654917
CD molecules [BR:
pvir04090
]
Proteins
120654917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
AAA_21
RsgA_GTPase
AAA_16
Zeta_toxin
AAA_15
AAA_30
DUF815
AAA_23
SRP54
APS_kinase
Motif
Other DBs
NCBI-GeneID:
120654917
NCBI-ProteinID:
XP_039788533
LinkDB
All DBs
Position
1N:complement(7191702..7196468)
Genome browser
AA seq
1178 aa
AA seq
DB search
MNTIIDQNARNLLILAAANWILAFLEGYCWTRTAERQSSRMRARYLSAVLRQDVEYFDLK
AGSTSEVITSVSSDSLAVQDALSEKVPNFVNNTTMFVGSYAVGFALLWRLTLVGLPALLL
LVVPGFLYGRTLIGLAHRIREQYMRPGAIAEQALSSVRTVYSFVAEGSTAARFSAALEQS
ARLGIKQGLAKGVAFGTEGISFLIFAFNIWYGTRLIMSHGYKGGAVYATSASIVIGGSAL
GQGLSNIKYFAEASAAAERMLEVIRRVPKIDSESNAGEELARVAGEVEFKDVEFCYPTRP
ENPVFRTFSLRVPAGHTVALVGSSGSGKSTAIALLERFYDPSAGQVTLDGVDIRRLRLKW
LRAQMGLVSQEPALFATSIRENILFGKEDATEEEVVAAARAANAHNFISQLPQGYHTQVG
EHGVQMSGGQKQRIAIARAIIKSPKVLLLDEATSALDTNSERVMQEALELASIGRTTIVI
AHRLSTIQNANTIAVMQSGEVKELGTHDELIANENGLYSSLVHLQQTKETVDSEEVGGRT
RSTSLMQQSGSHGMSKRISTASRSIIMPTLSMGNAEGNDNKTEPLKLPVPSFIRLLMLNA
PEWKQALMGSFSAIVVGGIQPVYAYAMGSMVSIYFLTDHKEMKDQTRIYSLFFVGLALVS
FLINIAQHYNFGVMGEYLTKRIREQMISKILTFEIGWFDSDKNSSGAICSQLAQDANVVR
SLVGDRMSLVIQTTSAVLIACIMSLAVAWRLALVMIVVQPLVIVCFYARRILLKSMSKKS
LQAQSECSKLAVEAVANLRTVTAFSSQDRILRLFDQAQEGPRKESIRQSWFAGLGLGTSM
SILRCIWALAFWYGGILMAQHRLTSKALFQTFLILISTGRVIADAGSMTTDLAKGADAIT
SLFSIIDRETEIDPDNPEGYKPENLEGKVDITEIDFAYSSRPDVIIFKGFSLSIQPGKST
ALVGQSGSGKSTIIGLIERFYDPLAGTIEIDGIDIKTYNLRALRKHIGLVSQEPTLFAGT
IRENIVYGTETAIEEEIVSAARNANAHDFITSLKDGYDTWCGERGVQLSGGQKQRIAIAR
AILKNPAILLLDEATSALDSHSEMVVQEALERILVGRTSLVVAHRLSTIQNCDVITVLEK
GIVLETGTHASLMSKGSAGTYFRLVTMQQGHNQHIDFA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccatcattgaccagaacgcaaggaatctcctcatcttggcagccgccaactgg
atcttggcgttcctggaggggtattgctggacgcggacggcggagcggcagtcgtcgcgg
atgcgggcgcggtacctgagcgcggtgctccggcaggacgtggagtacttcgacctcaag
gccggctccacgtcggaggtgatcaccagcgtctccagcgacagcctcgccgtgcaggac
gcgctgagcgagaaggtgcccaacttcgtgaacaacaccacaatgttcgttggcagctac
gccgtcggcttcgcgctgctgtggcggctcacgctggtggggctgccggccttgctgctg
ctcgtcgtccccggcttcctctacggccgcaccctcatcggcctcgcgcaccggatcagg
gagcagtacatgcgcccgggcgccatcgcagagcaggccttgtcgtcggtgcgcaccgtg
tactcgttcgtggcggagggcagcaccgcagcacggttctccgctgcactcgagcagtcg
gcacggctcgggatcaagcagggcctcgccaagggagtcgccttcggcaccgaaggcatc
tcctttctgatcttcgccttcaatatctggtacggcacccgcctcatcatgtcccacggc
tacaagggcggcgccgtctatgccacctccgccagcatcgtcatcggaggctcagcgctg
gggcaggggctgtcgaacatcaagtacttcgcggaggcaagtgcggcggcggagaggatg
ctggaggtgatccggcgggtgcccaagatcgactcggagagcaacgccggcgaggagcta
gccagggtcgccggcgaggtggaattcaaggacgtggagttctgctacccgacgcggccc
gagaaccccgtcttcaggaccttcagtctgcgcgtgccggcggggcacacggtggcactt
gttgggagtagcgggtcagggaagtcgacggcgatcgccctgctggagcggttctacgat
ccatcggcggggcaggtgaccctggacggcgtggacatccggcggctgcggctcaaatgg
ctgcgtgcgcagatggggctggtcagccaggagccggcgctgttcgcgacgtccattagg
gagaacatcttgttcggcaaggaggacgcaacggaggaggaggtcgtcgctgcggcgagg
gcggccaacgcccacaacttcatctcccagctgccgcagggctaccacacgcaggtgggt
gagcatggtgtccaaatgtccggaggacagaagcaaaggattgctattgctagagcaatc
ataaagtcacccaaggtccttctccttgatgaagccaccagtgcattggacactaattca
gagcgtgttatgcaggaggcgcttgaactggcctccattggtcgaactactattgtcatt
gcccatcgcctatccaccatccaaaacgcaaatacgattgcggtcatgcagtctggtgag
gtcaaggagctgggaacccatgatgagctcattgccaatgagaatggcctctactcatct
cttgtccaccttcaacagaccaaagagacagtggattctgaagaggttggtggaagaact
agaagtacatctcttatgcagcaatcaggcagccatggtatgagcaagaggatatccaca
gcaagcaggtcaatcataatgccaacgctatccatgggtaatgctgaaggtaatgacaac
aaaactgagccgctaaagcttcctgtgccatccttcataaggctattgatgcttaatgca
ccggagtggaagcaagcacttatgggaagctttagtgcaattgtggttggaggcatacaa
cctgtgtacgcatacgcaatggggagcatggtctcgatctacttcttgacagatcataaa
gagatgaaggatcaaaccagaatctactcattgttcttcgttggtcttgcattggtctca
ttcctgatcaatattgcgcaacattacaacttcggtgtcatgggggaatacctcaccaaa
aggataagagaacagatgatttcaaaaatactcacttttgagattgggtggttcgatagt
gataagaactctagtggtgccatatgctcccaacttgcccaggatgccaacgttgtgaga
tcgctcgtcggtgatcgaatgtcccttgtcatccaaacaacttctgcagtactcattgcc
tgcatcatgagtctcgcagtcgcttggcgtttggcgcttgtgatgattgtagtgcaacca
cttgtcattgtttgcttttatgctcgtcgtatcttactaaagagcatgtccaagaaatca
ttacaggcacaatctgaatgtagcaagctagctgttgaggcagtcgctaatcttcgcaca
gtaactgctttctcatcccaagaccgcatcctacgcctctttgaccaagcacaggaaggc
cctcgcaaggaaagtatcaggcagtcctggtttgctggtctggggctcggcacctccatg
agcattttgagatgtatatgggccctcgccttttggtatggtgggatactcatggctcag
catcgccttacttccaaggccctatttcaaaccttcttgattttgataagcacaggacgt
gtgatagcagatgcaggtagtatgacaacagaccttgccaagggtgctgatgcaatcact
tcacttttttcaattattgacagggagaccgaaattgaccctgacaaccctgagggatac
aaaccagagaatctcgaaggcaaggtggacattacagaaattgattttgcgtattcatca
aggccagatgtgatcatcttcaaaggattctccttaagcatccagccaggtaagtcaaca
gctcttgttgggcaaagtgggtctggcaagtcaaccatcattgggcttatcgagcggttc
tatgatccccttgctgggactatagagatcgatggcatagacatcaaaacatataaccta
cgagccctacgaaaacacatcggactggttagccaagaaccaacactttttgcaggtacc
atcagagagaacattgtatatggcactgaaacagccattgaggaagaaattgtgagtgca
gcaaggaatgccaatgcacatgatttcattactagcctcaaggatggatacgacacatgg
tgtggtgagagaggtgttcagttatcaggaggtcaaaagcagcgcattgcgattgctcgt
gcaatcttaaagaaccctgctatcttgctattggatgaagcaacaagtgcattggatagc
cactccgagatggtggtacaggaggcacttgaaagaatactggtcggtaggaccagtcta
gtagtcgcacacaggcttagcaccatccaaaactgtgatgtgatcactgtgcttgagaaa
gggattgttctagagacaggcacacatgcatccctcatgagcaagggttctgctgggaca
tactttagattggttaccatgcaacaaggacacaatcaacatatagattttgcatga
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integrated database retrieval system
