Panicum virgatum (switchgrass): 120656322
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Entry
120656322 CDS
T07260
Name
(RefSeq) very-long-chain 3-oxoacyl-CoA reductase 1-like
KO
K10251
17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:
1.1.1.62
1.1.1.330
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00062
Fatty acid elongation
pvir01040
Biosynthesis of unsaturated fatty acids
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01212
Fatty acid metabolism
Module
pvir_M00415
Fatty acid elongation in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00062 Fatty acid elongation
120656322
01040 Biosynthesis of unsaturated fatty acids
120656322
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pvir01004
]
120656322
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.62 17beta-estradiol 17-dehydrogenase
120656322
1.1.1.330 very-long-chain 3-oxoacyl-CoA reductase
120656322
Lipid biosynthesis proteins [BR:
pvir01004
]
Fatty acid synthase
Component type
120656322
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
adh_short
adh_short_C2
KR
Epimerase
NAD_binding_10
F420_oxidored
Motif
Other DBs
NCBI-GeneID:
120656322
NCBI-ProteinID:
XP_039790308
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All DBs
Position
1N:complement(48890411..48892681)
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AA seq
326 aa
AA seq
DB search
MAGTCAHVEFLRAQPAWALALATVGLLVAVRAAIRLALWVYAAFLRPGKPLRRRYGAWAV
VTGATDGIGRAIAFRFAAAGLGLVLVGRNPEKLAAVAAEIKAKHPKVPEVRTFVLDFAAV
GLAAGVEALKEAIRGLDVGVLVNNAGLSYPYARYFHEVDEELMRSLIRINVEGVTRVTHA
VLPGMVERKRGAIVNIGSGSASVVPSDPMYSVYAATKAYVDQFSRCLYVEYKSKGIDVQC
QVPLYVATKMASIRKSSFMVPSADTYARAAVRHIGYEPRCTPYWPHSVMWFLISILPESL
IDNFRLGMCIKIRKKGLAKDAKKKSL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggccggcacgtgcgcccacgtcgagttcctccgcgcgcagccggcctgggcgctggcg
ctggccaccgtgggcctcctcgtggccgtccgcgccgccatccgcctcgcgctctgggtc
tacgccgcgttcctccgccccggcaagcccctccgccgccgctacggcgcctgggccgtc
gtcaccggcgccaccgacggcatcggccgcgccatcgcgttccgcttcgccgccgccggg
ctcgggctcgtcctcgtcggccgcaacccggagaagctggccgccgtggccgccgagatc
aaggccaagcaccccaaggtccccgaggtgcgcaccttcgtgctcgacttcgccgccgtg
gggctcgccgcgggcgtcgaggcgctcaaggaggccatccggggcctcgacgtgggggtg
ctcgtcaacaacgccgggctgtcctacccgtacgcgcgctacttccacgaggtggacgag
gagctgatgcgcagcctcatccgtatcaacgtcgagggcgtcacgcgggtcacccacgcc
gtgctccccggcatggtcgagaggaagcgcggcgccatcgtcaacatcggctccggctca
gcctccgtcgtaccctctgatccgatgtactccgtctacgccgccaccaaagcgtatgtc
gaccaattctcaagatgtctttatgttgaatacaagagcaagggtattgatgtgcagtgc
caggtgcctctatatgtggcaacaaagatggcatctatcaggaaatcctccttcatggtt
ccatctgcggacacttacgctcgtgctgctgttcgccacattggctatgagcctaggtgc
acgccgtactggccacactctgtcatgtggttcttgatctccattcttcctgagtccctc
atcgacaacttccgcctaggcatgtgcatcaagatccgcaagaaggggctagccaaagac
gccaagaagaagtccctgtga
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