Panicum virgatum (switchgrass): 120659586
Help
Entry
120659586 CDS
T07260
Name
(RefSeq) SEC12-like protein 1
KO
K14003
prolactin regulatory element-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120659586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120659586
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120659586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
120659586
NCBI-ProteinID:
XP_039793710
LinkDB
All DBs
Position
2N:7003608..7008392
Genome browser
AA seq
397 aa
AA seq
DB search
MDSGGGEASAAGGGNVACAAWIRRRDEKAAAARVFVAYGWAGAAGSPPALEVLGFDAKEC
ALSPEPLARAVLGEGGAGDAPRGIAVHPAGDELVCATAKGCRLFKLLFEEFSVRIIPRDT
PSLESVGPQKCLAFSTDGAKFAIGGEDARLRIFHWPSMNVLLDEPKAHKSFRDMDISLDS
EFLVSTSTDGSARIWKIDEGAPLVNLTRSSDEKIECCRFSRDGMKPFLFCTVAKGSKVVT
VVWNISDWKRIGYKRLLGKPISTLSVSLDGKYLALGSHDGDFCAVDVKKMEVSHWSKKAH
LGSPVTSIEFCPTERVVISTSNQWGAELTKLNVPADWKEWQLWLVLLALFLASAALFYMF
YECSDSFWKFPMGRNQPAKPWSVLKESPPVPEDQTPW
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggcggcggcgaggcttcggcggcggggggagggaacgtggcgtgcgcagcg
tggatccggcgccgtgacgagaaggcggcggcggcgcgggtgttcgtggcgtacggctgg
gcgggggcggcgggatccccgcccgcgctcgaggtgctcggcttcgacgccaaggagtgc
gccctctcccccgagcccctggcgagggccgtgctcggggagggcggcgcgggagacgcg
ccgcgcggcatcgcggtgcaccccgccggcgacgagctcgtctgcgccacggccaagggc
tgcaggttattcaaactgctttttgaagagttctcggttcgcattattccaagagatacc
ccatctctagaatctgttggaccccagaagtgtcttgctttcagcacagacggtgccaaa
tttgccattggtggagaggatgcacgtctcagaatattccattggccaagcatgaatgtg
cttttggatgaacctaaagctcataagtccttccgagacatggatatcagcttagactcg
gagtttttagtctcaacatccactgatggatctgcaagaatatggaagatagatgagggc
gcaccactggtcaatttgactcgatcctcggatgagaagatcgagtgctgtcgcttttct
agggatggcatgaagccattcctgttttgcacagttgcaaaaggttctaaagttgttact
gttgtctggaacataagtgattggaagagaattggatacaaaagacttctgggaaagcct
atctccacactttcagttagcttggatggaaagtatctggcattaggaagccatgacggt
gacttctgtgctgttgatgtaaagaaaatggaagtttctcactggagcaagaaggctcat
cttggttccccagtcacatccatcgagttctgccctactgaaagggttgtaatctccaca
tccaatcaatggggagcagagctaacgaaactaaacgtgcctgctgactggaaagaatgg
cagctctggctcgtgctcctggctctcttcctggcgtctgctgccctgttttacatgttc
tatgagtgctcggactcattctggaaattccccatgggccggaaccagcccgccaagccg
tggagcgtgctgaaggagtcccctccggtcccagaggaccagactccatggtga
DBGET
integrated database retrieval system
