Panicum virgatum (switchgrass): 120660683
Help
Entry
120660683 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120660683
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120660683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120660683
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
120660683
DNA repair and recombination proteins [BR:
pvir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120660683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
120660683
NCBI-ProteinID:
XP_039795232
LinkDB
All DBs
Position
2N:complement(45338090..45342457)
Genome browser
AA seq
401 aa
AA seq
DB search
MSAAVSPGVAGTARRLSPSPKPAGARDKDKDKEEPPSREGADKARRRLLLPSAPARGAAA
SMLLRRASAGARGSSYVHPSSSLSVSCASEASTESLCSRASTGRIGRRPAGPPVGAPRRR
AAGSAGPPSARPASSRKVVASAVPGGAATDAPAVLMLGSVTATSAGPPRCPWVTPNTDPC
YAAFHDQEWGVPVHDDKKLFEMLTLSGALAEMAWPAILSKRDTFREVFMDFDPVLVAKLN
ERKFLAPSSPASSLLSEHRLRIIIENARELLKVIEEFGSFDSYCWSFLSNKPMVGGYRHT
REVPLRTAKADAISQDLMRRGFLGVGPTVVYAFMQAVGMANDHLVTCYRFEECCDIKDVV
AGYGDSCKPAAGSEQEVSMLCGLVQCVALEPSRAATVMSIS
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggcggtgtctcccggcgtggccggcaccgcacggagactgtctccgtctccc
aagccggccggcgccagggacaaggacaaggacaaggaggagcctccatcgcgcgagggc
gccgacaaggccaggaggaggctgctgctgccgtcggccccggccaggggcgccgcggcg
tccatgctgctgcgccgtgccagcgccggcgcgcgggggagcagctacgtgcacccgtcg
tcgtcgctcagcgtctcgtgcgcgtcggaggcgtccaccgagtccttgtgcagccgcgcg
tcgacgggccggatcggccgccgccccgcgggcccgcccgtgggagccccgcggcggagg
gcggcgggctcggccgggcctccttctgcgcgcccggcctcgtccaggaaggttgttgcc
agcgccgtgccaggcggcgcggccactgatgctccggcggtgctgatgctgggctcggtc
accgcgacgtcggcggggccgccgaggtgcccctgggttaccccaaacactgatccctgc
tacgctgccttccatgaccaagagtggggagtgccagtacatgacgacaagaaactgttt
gaaatgcttactctgtccggtgcactggctgagatggcatggcctgcaattctcagcaag
agggacaccttcagagaagtgttcatggacttcgaccctgtgttggtggcgaagctgaac
gagagaaaattcttggcgccaagcagccctgctagctccctgctgtctgaacacaggctg
cgcataatcatcgaaaacgcacgtgagttgctgaaggtcatagaggagtttggatcgttc
gacagctactgctggagcttcctgagcaacaagccgatggttggtggatacaggcacacg
cgggaggtgccgctgcggacggcgaaggccgacgccatcagccaggacctgatgcgtcgg
gggttcctcggcgtcggcccgacggtggtctacgccttcatgcaggccgtcggcatggcc
aacgaccacctcgtcacctgctaccgcttcgaggagtgctgcgacatcaaagacgtagtc
gccggctacggtgacagttgcaagccggcagcggggagcgagcaggaggtgagcatgctc
tgtgggctggtgcagtgcgtcgccctggagccgtcgagagccgccacggtgatgagcatc
tcatag
DBGET
integrated database retrieval system
