Panicum virgatum (switchgrass): 120661902
Help
Entry
120661902 CDS
T07260
Name
(RefSeq) 4-alpha-glucanotransferase DPE1, chloroplastic/amyloplastic-like
KO
K00705
4-alpha-glucanotransferase [EC:
2.4.1.25
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120661902
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.25 4-alpha-glucanotransferase
120661902
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_77
Motif
Other DBs
NCBI-GeneID:
120661902
NCBI-ProteinID:
XP_039796844
LinkDB
All DBs
Position
2N:66249645..66264579
Genome browser
AA seq
582 aa
AA seq
DB search
MVLARVLTLPLPAPSSTPNRRFLLPPRAARVALAPVRADACRAASAMAAVPALDPAAAAA
VGIGEELPEGYDQMMPTVEPARRRRAGLLLHPTSLRGPHGIGDLGDEALAFLHWLRDAGC
TLWQVLPLVPPGRTSGEDGSPYSGQDANCGNTLLISLEELVKDGLLMEDELPSPVDVEHV
EFDTVANLKEPLIAKAAERLLLGQGDLRTQYDCFKKNPNISGWLEDAALFAAIDKSIGAF
SWYEWPEPLKNRHLGALEDIYQKQKDFIETFMAQQFLFQRQWQRIRKYAQKLGISIMGDM
PIYVGYHSADVWANRKSFLLDKNGFPTFVSGVPPDAFSETGQLWNSPLYDWKAMEADDFS
WWIKRIKRALDLYDEFRIDHFRGLAGFWAVPSDAKVALVGNWRAGPRNAFFDALFKAVGS
INIIAEDLGVITEDVVQLRKSIGAPGMAVLQFAFGGGSDNPHLLHNHEMDQVVYTGTHDN
DTVLGWWQNLPEEEKQIVIKYLPEAKNTDISWTMITAALSSVARTSMVTMQDILGLDSSG
RMNTPATQKGNWRWRIPSSVGFDSLSPEAAKLKDLLALYNRL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggttctcgcgcgagtcctcacgctccctctgcccgccccgtcgtccacgcccaaccgc
cgcttcctcctcccgcctcgggcggcgcgtgtggcactggcacccgttcgggccgacgcc
tgccgggcggcgagcgcgatggcggctgtgccggctctggaccccgccgcggccgcggcc
gtgggcatcggggaggagctgccggaggggtacgatcagatgatgcccaccgtggagccg
gcgcggcggcgtcgcgcggggttgttgctgcacccgacgtccctccggggcccgcacggc
atcggcgacctcggcgacgaggcgctcgccttcctccactggctacgcgacgccggctgc
acgctctggcaggttctgccacttgttcctccggggagaacatctggggaggatggatct
ccttattctggacaggatgccaactgtggtaatacccttttgatatctcttgaagagctt
gtaaaagatggtcttttgatggaagatgaacttcctagtcccgtggatgtggagcatgtt
gaatttgataccgttgcaaatctgaaagaacctcttattgcaaaggcagcagagaggctc
ttactgggccaaggagacctcagaacgcaatatgactgcttcaagaaaaatccaaatata
tcaggttggcttgaagatgcagcactttttgctgctattgacaaaagcattggtgcattc
tcttggtacgagtggcctgaacctctgaaaaatcgccatcttggagccttggaagatata
tatcaaaaacagaaggacttcatagagacatttatggctcagcaattcttatttcaaagg
caatggcagcggattcgtaaatatgcacagaagttgggtatcagcataatgggtgacatg
cctatatatgttggctaccatagtgcagatgtatgggcaaacaggaaatcatttttgctg
gacaagaacggtttccccacttttgttagtggtgttccacctgatgcatttagcgaaact
ggtcagctatggaacagtccgttgtacgactggaaagctatggaagcagatgacttttca
tggtggataaagaggattaaacgagcccttgatttgtatgacgagttccgcattgaccat
tttcgggggcttgcgggtttttgggcagtcccatctgatgcaaaagtagcactagttgga
aactggagggctggaccgaggaatgccttttttgatgcgctcttcaaagctgttggtagc
ataaatataatagcagaagacctgggggtgattactgaagatgtggttcagctaaggaaa
tcaattggggcccctgggatggcagttctccagtttgcttttggaggtggttctgataac
cctcacttgctgcataaccatgaaatggaccaagttgtgtataccggaacacatgataac
gatacagttcttggctggtggcaaaatttacccgaggaagagaagcaaattgtgattaag
tatctaccggaagccaagaatactgacatctcatggacaatgattactgctgccctttct
tctgttgcaaggacttccatggtaaccatgcaagatattctgggcctcgacagttctggt
agaatgaacactccagctacccagaaaggaaactggagatggaggataccaagctctgtt
ggcttcgacagccttagccctgaagcagcaaagctgaaggatttgcttgcgctgtacaat
cgtctgtga
DBGET
integrated database retrieval system
