Panicum virgatum (switchgrass): 120662461
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Entry
120662461 CDS
T07260
Name
(RefSeq) calcium-dependent protein kinase 17-like
KO
K13412
calcium-dependent protein kinase [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120662461
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120662461
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120662461
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: CAMK group
CDPK family
120662461
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
EF-hand_7
EF-hand_1
PK_Tyr_Ser-Thr
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_4
EF-hand_9
AIF-1
Kinase-like
DUF5580_M
Kdo
APH
SPARC_Ca_bdg
tRNA_synt_1c_R1
Motif
Other DBs
NCBI-GeneID:
120662461
NCBI-ProteinID:
XP_039797540
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All DBs
Position
2K:complement(5059325..5064192)
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AA seq
567 aa
AA seq
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MGNTCVGPNASSDRHSFLTSVSLAVLWRPADARAEPSPTPDPTPSTPPPTSSRPPDPVTI
SDSEHSPRNPNGKPKPKPKVKRVQSAGLLVGSVLRRDSERLKDIYTLGKKLGQGQFGTTY
QCVEKATGKQFACKSIAKRKLITDEDVEDVRREIQIMHHLAGHPNVISIVGAYEDAVAVH
LVMELCAGGELFDRIIQRGHYSEKAAAQLARVIIGVVEACHSLGVMHRDLKPENFLFVNQ
KEDAPLKAIDFGLSIFFKPGEIFSDVVGSPYYVAPEVLMKDYGCKVDVWSAGVIIYILLS
GVPPFWDETEQGIFDQVLKGELDFSSDPWPSISESAKDLVRKMLNRDPRKRLTAHEALRH
PWVCVDGVAPDKPLDPAVLTRLKQFSAMNKLKKMALRVIAENLSEDEIAGLREMFKMLDT
DNSGQITLEELKSGLKRVGANLKDSEIVTLMEAADIDNSGSIDYGEFLAATLHLNKVERE
DNLFAAFSYFDKDGSGYITHDELQKACEEFGIRDTHLEDIIRDIDQDNDGRIDYNEFVMM
MQKGNNPLRKKGYAQMSFGLREALKLG
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggggaacacctgcgtcggccccaacgcctcctcggaccgccacagcttcctcacctcc
gtctccctcgccgtgctctggcgccccgccgacgcccgcgccgagccctccccgaccccc
gaccccaccccctccactcctcccccaacctcctccaggccccccgaccccgtcaccatc
tccgactccgagcactcgccccgcaacccgaacggcaagcccaagcccaagcccaaggtg
aagcgcgtgcagagcgccggcctcctcgtcggctccgtcctgaggcgggactccgagcgg
ctcaaggacatctacaccctgggcaagaagctcgggcaggggcagttcggcaccacctac
cagtgcgtcgagaaggcgacggggaagcagttcgcctgcaagtccatcgccaagcggaag
ctcatcaccgacgaggacgtcgaggatgtgcgccgcgagatacagatcatgcaccacctc
gccggccaccccaacgtcatctccatcgtgggggcatacgaggacgcggtcgccgtgcac
ctcgtcatggagctctgcgcgggaggggagctgttcgacaggatcatacagcgggggcac
tactcggagaaagccgccgcgcagctggcgcgggtgatcattggggttgtcgaagcttgc
cattccctcggggtgatgcacagagacctcaagccggagaatttcttgtttgtcaaccaa
aaggaggacgcgccgttaaaggctattgatttcgggctttccatcttcttcaaaccaggt
gaaatattttcggatgtcgttggaagtccttactatgttgcccctgaggttctgatgaaa
gactatggctgcaaggtggatgtgtggagcgcaggtgtaataatttatatcttgttgagt
ggggttcctccattttgggatgaaactgaacaaggaatatttgaccaagttctgaaaggc
gaacttgatttttcatccgatccctggcccagtatttcagagagtgcaaaggatttggtc
agaaagatgctaaaccgtgatcccaggaagagattgactgcacatgaagctctacgtcat
ccctgggtttgtgttgatggagttgctccggacaaacctctggatcctgctgtcttaacc
agattgaaacagttttctgcaatgaataaactaaagaagatggcccttagggtcattgct
gagaatttgtccgaagatgaaattgcaggattgagagaaatgttcaaaatgctggacact
gacaatagtgggcagatcacattggaggaactaaaaagtggcttaaagagagttggtgct
aacttaaaggactcggaaattgtaacactaatggaagcggcagatatcgataacagtggt
tccattgattacggagagttccttgctgcaactttacatctgaacaaagttgaacgagaa
gataatctcttcgcagcattctcatactttgataaagatggcagtggttacattactcat
gatgagctacaaaaggcatgtgaggagtttggtatacgagatacacacctagaagatatc
atccgcgacattgatcaagacaatgatggccggatcgactacaatgaatttgtaatgatg
atgcagaagggaaataacccactaaggaaaaagggttacgcccagatgagctttggtctt
agggaagcactgaagcttggctaa
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