Panicum virgatum (switchgrass): 120664317
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Entry
120664317 CDS
T07260
Name
(RefSeq) OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 5-like
KO
K18342
OTU domain-containing protein 6 [EC:
3.4.19.12
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120664317
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120664317
Ubiquitin system [BR:
pvir04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
120664317
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OTU
Peptidase_C65
Motif
Other DBs
NCBI-GeneID:
120664317
NCBI-ProteinID:
XP_039799409
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All DBs
Position
3N:complement(12055392..12057337)
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AA seq
212 aa
AA seq
DB search
MSSNLDSAKPSKGARRREKKAKEEAAREQRIQEEQSNLVSDRMLENEKVENKLEPLGLTI
QEIKPDGHCLYRAVENQLLLHSKGTAQYSYQDLRQMTAKYMREHADDFLPFFLAEGKAET
GSDPSESFEKYCQEIESTAAWGGQLELGALTHCLKKHIVVYSGSFPDVEMGQEYKSGSGG
NSAGDASIRLSFHRHAYGLGEHYNSVIPTESS
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaatttggattccgcaaagcccagcaagggtgcacggcggcgagagaagaag
gcaaaggaggaagctgctcgggagcagcggatccaagaagagcaaagcaatctcgtcagc
gaccgcatgctggaaaacgagaaggttgaaaataaacttgagcccttggggctgaccatt
caagaaataaagccggatggccactgcctgtaccgtgctgtcgaaaaccagttgttgctc
cattccaagggcactgcacagtacagctaccaggacctacggcagatgacagctaagtac
atgagggagcatgcagatgacttcctcccgtttttcttagcagaaggcaaggctgagact
gggtcagatccctctgagagctttgagaagtactgccaggagatcgagtccacagcagcc
tggggtggacagcttgagcttggtgcgctgacccactgcctcaagaagcacatcgtggtc
tactcgggctccttcccggatgtggaaatgggccaggaatacaaatctggatccggaggt
aatagtgctggggatgctagcatcaggctgtcctttcataggcatgcctatggtcttggt
gagcactacaactcggtgattccaactgagtcatcataa
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