Panicum virgatum (switchgrass): 120664569
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Entry
120664569 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit B-4-like isoform X1
KO
K08065
nuclear transcription Y subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120664569
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120664569
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Motif
Other DBs
NCBI-GeneID:
120664569
NCBI-ProteinID:
XP_039799767
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Position
3N:complement(15183336..15186255)
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AA seq
193 aa
AA seq
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MSPLHPRHQPPETRLQIRRPVASSPRDHPSQPTALISSAISVHLRFHRQEGSGMSEAESA
PETGGGSYGGKEQDRYLPIANIGRIMRRAVPDNGKIAKDAKESVQECVSEFISFITSEAS
DKCMKEKRKTINGDDLIWSLGTLGFEEYVEPLKHYLKLYRETEGDTKGSKSSDHTGKKEI
VLIGEPGSSLDGV
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgtcccccctccatcctcgccaccaaccccccgaaacgcggctccagatccggcggccg
gtggcgtcctccccgcgcgaccacccatcacaaccaacggcgctgatctcctccgccatc
tccgtccatctccgtttccatcgccaggagggttccggcatgtcggaagccgagagcgca
ccggagaccggcggcggcagctacggagggaaggagcaggatcggtacctgccgatcgcc
aacattggccgcatcatgcgccgcgcggtgccggacaacggcaagatcgccaaggacgcc
aaggagtctgtccaggagtgcgtctccgagttcatcagcttcatcaccagcgaagcgagt
gacaagtgcatgaaggagaagcgcaagaccatcaatggcgatgacctgatctggtccctg
gggacgctcggcttcgaggaatacgtcgagcccctcaagcactacctcaagctctaccgg
gagacggagggtgacacaaagggttcgaaatcttctgatcatacaggaaagaaagagatt
gtactcattggtgaacctggatcatcgttggacggcgtgtag
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