Panicum virgatum (switchgrass): 120665139
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Entry
120665139 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT6-like isoform X1
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120665139
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120665139
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
120665139
NCBI-ProteinID:
XP_039800534
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Position
2K:complement(8787330..8791693)
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AA seq
663 aa
AA seq
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MRRAAGAGAAAWGVGSFRRRVMEGLAAALLLYALVVLALESPLVSTSLSPGAGAAVARKL
YLSSGAATARSAPARPAKEPRPAAADVAGPSARGRDRLSRFATGLDLRLLDTARSGALRG
QIADAVAAGARVFTELETLDADAAALAAPSGEGDAAPARCPQSIALSAEQLRARGRVVEL
PCGLALGSHVTVAATPRAPHEERDPAIAVVRDGEVPAMVSQFMVELQGLRAVDGEDPPRV
LHFNPRLRGDWSGRPVIEQNTCYRMNWGAAQRCEGWRSRPDEETVDGLVKCEKWIRDDDQ
RSEESKTAWWLNRLIGQKKEVNFDWPYPFVEGRLFVLTLSAGLEGYHVSVDGRHVTSFPY
RTGFVLEDATGLFLNGDLDVHSVFAGSLPTTHPSFAPQNYLDFSTVWQAPPLPDEPAEIF
IGIMSSANHFAERMGVRKTWMSSVRKSPNMVARFFVALHGRKEVNVELKKEAEYFGDIVF
VPFLDNYDLVVMKTLAICEYGVNVVSAKYVMKCDDDTFVRLDSVVAEIKKVPSGRSLYIG
SMNIQHKPLRHGKWAVTYEEWPEEVYPAYANGPGYVLSSDIAHFIMSEFMKQGLTLFKME
DVSMGLWVQQFNRTIPVEYIHSAKFCPYGCIDDYYTAHYQSPRLMLCMWEKLLEGRPGCC
NVR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcggagggcggcgggcgcgggcgcggcggcgtggggcgtcgggtcgttccgccgccgc
gtgatggagggcctggcggcggcgctgctcctctacgcgctcgtcgtgctcgccctcgag
tccccgctcgtgtccacctcgctctcccccggggccggggccgccgtggcgcggaagctc
tacctctcctcgggcgccgcgacggcgcggtccgcccccgcgcgccccgccaaggagccc
cgccccgcggccgcggacgtcgcgggcccgtcggcgcgcgggcgggatcggctctcccgc
ttcgccaccgggctcgacctccgcctcctcgacaccgcccgctccggcgcgctccgcggg
cagatagccgacgccgtcgcggcgggcgcgcgcgtgttcaccgagctcgagaccctcgac
gccgacgcggccgccctcgcggcgccctccggagagggggacgcggcccccgccaggtgc
ccgcagtcgatcgcgctctccgcggagcagctccgcgcgcggggccgcgtggtggagctc
ccctgcgggctcgcgctggggtcccacgtcacggtggccgcgacgccccgggcgccgcac
gaggagcgggaccccgcgatcgcggtcgtcagggacggggaggtgcccgccatggtgtcg
cagttcatggtcgagctgcaggggctcagggccgtcgacggcgaggacccgccccgcgtg
ctccacttcaacccgcgcctccgcggggactggagcggcaggcccgtcatcgagcagaac
acgtgctaccgcatgaactggggcgccgcgcagcgctgcgagggatggaggtcgcgcccc
gatgaggagactgtggatgggctggtgaagtgcgagaagtggattcgggacgacgaccag
cgctctgaagaatcaaagacagcgtggtggctgaatcgcctgatcgggcagaagaaggag
gtcaatttcgattggccgtatcctttcgtcgagggcaggttatttgttctgactctcagc
gctgggttggagggttaccatgttagcgtcgatgggcggcatgtgacttcgttcccttac
cgcactgggtttgtgcttgaggacgccacaggcttgttcctgaatggggacctcgatgtg
cattcagtgtttgcagggtctttgcccactactcacccgagctttgcaccacagaattat
ttggacttttctactgtttggcaggcccctcctctgcctgatgaaccagcggagattttc
attggcattatgtcttctgccaatcattttgctgagcggatgggtgttaggaagacatgg
atgtcttctgtccgcaagtcaccaaacatggtggctcgtttttttgttgcactgcatggc
agaaaggaagtgaatgtggagttgaaaaaggaggcagagtattttggggacattgttttt
gtaccatttctggacaactatgatcttgttgttatgaagactcttgcaatatgcgagtac
ggggtgaatgttgtctcagctaaatatgtaatgaagtgcgacgatgatacttttgtgaga
ctcgattcagtagtcgctgaaattaagaaggtaccaagtgggagaagtctctacataggg
agcatgaatatccaacacaagccattacgccatgggaaatgggccgtgacttatgaggag
tggccggaagaggtgtatccagcatatgcaaatggccctggatatgttttatcatccgat
attgcacattttatcatgtcagaattcatgaagcaaggattaacgctctttaaaatggaa
gatgtgagcatgggtttgtgggttcagcagttcaacaggacaatacctgttgaatacatt
cacagtgccaaattttgtccatatggatgcattgacgactactatactgcacattaccaa
tcaccaaggctgatgttatgcatgtgggaaaagttattggaaggaagaccagggtgttgc
aatgtgagataa
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