Panicum virgatum (switchgrass): 120666930
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Entry
120666930 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT2-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120666930
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120666930
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
120666930
NCBI-ProteinID:
XP_039802855
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Position
3N:67150178..67153649
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AA seq
653 aa
AA seq
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MKRARSSEVFLGAGRLRARRRLAPLLAAAAFAYLLFVSVKLAGFGSAGPAAAVGRLAAAG
AGEPLRRRVEQPAPRARAAAVSGYGRITGEILRRREAGEGRRRRWGQLGNFTELERAAAE
AWALGARAWEAASAFTGDVDSIASLDAGEGPAECPGSLALGGGETTVAFLPCGLAAGSAV
TVVGTARAARPEYVEALERSGAGNGTVMVAQFAVELRGVRAADGEEPPRILHLNPRLRGD
WSGRPVLEMNTCFRMQWGRAQRCDGTPSRDDDQVDGFRKCEKWQRQDIVESKETRTSSWF
NRFIGRAKKPEMTWPFPFSEGNMFVLTIQAGVEGYHINMGGRHVASFPHRMGFALEDATG
LAVTGGIDVHSVYATALPRSHPSFSLQQVLEMSERWKARPVPEEPIQLFIGILSATNHFA
ERMAIRKTWMQFPAIQLGSVVARFFVALSHRKEINAALKKEAEYFGDIVILPFIDRYELV
VLKTVAICQYGVQNVTADYIMKCDDDTFVRLDIVLQQITTYNRTLPLYLGNLNLLHRPLR
SGKWAVTYEEWPEAVYPPYANGPGYVLSIDIARDIASRHANHSLRLFKMEDVSMGMWVED
YNATAPVQYVHSWRFCQFGCVDYYFTAHYQSPRQMLCLWDKLSAGQARCCNYR
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgcgcgcagctccgaagtgttccttggcgccggccggctgcgcgcgcgccgc
cgcctggcgccgctcctcgccgccgcggcgttcgcgtacctcctcttcgtgtccgtcaag
ctcgccggcttcggtagtgcgggccccgcggcggccgtcggccgcctggcggccgccggc
gcgggcgagccgctgcggcggcgggtggagcagccggctccccgcgcgcgagccgccgcg
gtgtccgggtacggccgcatcaccggggagatccttcgtcggcgggaggcgggcgagggg
cggcggaggcggtgggggcagctggggaacttcacggagctcgagcgcgcggccgcggag
gcgtgggcgctcggggccagggcgtgggaggcggcgtccgcgttcacgggcgacgtcgac
tccatcgcctcgctcgacgcgggggaggggccggccgagtgccccggctcgctggccctc
ggcggcggggagacgacggtggcgttcctgccttgcgggctggcggccgggtcggcggtg
acggtggtgggcacggcgcgggcggcgcggccggagtacgtcgaggcgctggagcggagc
ggcgcggggaacggcaccgtgatggtggcgcagtttgcggtggagctgcgcggggtgcgc
gccgccgacggcgaggagccgcccaggatactgcacctcaacccgcggctgcgcggggac
tggagcggccgacccgttctcgagatgaacacctgcttcaggatgcagtggggcagggcg
cagcgctgtgatggcactccctcgagagacgatgaccaggttgatggattcagaaaatgt
gagaaatggcagcgtcaggacatagttgaatcaaaagaaacaaggacaagctcatggttc
aacaggtttatcggccgagcaaagaaaccagaaatgacatggccattcccattttcagag
ggcaatatgtttgttctaacaatccaagctggtgtggaaggatatcatattaacatggga
ggccgccatgttgcctcatttcctcataggatgggatttgctcttgaagatgcgacaggt
ttagccgtgacagggggcatagacgttcactctgtgtatgcaacagctctcccaaggtct
catcctagtttttctctgcaacaagtattggaaatgtctgaaagatggaaggctcgccct
gtaccagaggaaccaattcagcttttcattggcatcctctctgctacaaaccattttgct
gagcgcatggctattaggaaaacctggatgcagtttccagccatccaattgggaagtgta
gttgctcggttctttgtcgcgctgagccatagaaaggagataaatgcagccctaaagaag
gaagcagaatattttggagatatagtcattctgccgtttatcgaccgatatgagctggtg
gttctgaaaacagttgcgatatgtcaatatggagtgcaaaatgttactgcagattatatc
atgaagtgtgatgatgacacctttgtgcggctggatatcgtattgcaacaaatcactacc
tacaacagaaccttacctctttatcttggcaacttgaatctattgcacaggcctctaaga
agtggcaagtgggctgtgacctatgaggaatggcctgaagctgtgtatcccccgtacgcc
aatggacctggttatgtcctctcaatcgacattgcgagagacatagcatcccggcatgca
aatcactccctgaggctgttcaagatggaggacgtgagcatgggcatgtgggtggaggac
tacaacgccactgcgcccgtgcagtacgtccacagctggaggttctgccagttcggctgt
gtggattactacttcacagcacattaccagtcccccaggcagatgctatgcctctgggat
aaactctcagccggccaagcacgctgctgtaactacagataa
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