Panicum virgatum (switchgrass): 120669194
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Entry
120669194 CDS
T07260
Name
(RefSeq) aspartyl protease family protein At5g10770-like
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
TAXi_N
TAXi_C
Asp
Motif
Other DBs
NCBI-GeneID:
120669194
NCBI-ProteinID:
XP_039804919
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Position
4N:complement(17450939..17455507)
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AA seq
464 aa
AA seq
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MSGFVFIPMHPSNNVAVFYKVTLMSISVAGRPLDLPPTAFPHGDYGMTLDSSTVVMVLLM
APWALFSSLYLDGCLSIIPCLAETLRRDEARWNHIIGTSIGHTAVGSPDNGEVIPAELAH
SLEYVVTVGFGTPAIPQTVVIDSGSDFAWVQCKPCDSSECDPQKDPLFDPRKSSTYAPVP
CDSGACRNISYNEGNGCTGEKLCGFALSYADASNSTGVYSRDKLTLAPGVAVEGFRFGCA
HGRGGWDNMSAGLIGLGNSPESLVSQAAPSYGGSFSYCLPPTGSSAGFLALGRPSDTSGF
AFTQMHPSDHVAVFYKVTLTGISVAGRPLDVPPSAFPHGDYGMILDSGTVVTVLPAAPYA
ALRTAFRRAMAAYPPAPPIHPADTCYNLTGYGNVTVPGVALTFLGGATVELYNPGGILVE
GCLAFSGLRPDNHGNGVIGNVNQRAFEVLYDPVQLSVGFRAGAC
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcttcgtgttcatcccgatgcacccatcgaacaatgtggccgtgttctacaag
gtgacgcttatgagcatcagcgtcgccggtcggccgctcgaccttcctcccacggcgttc
ccgcacggcgactacggcatgaccctcgactccagcacggttgtcatggtgctgctaatg
gcgccctgggcgctcttctctagcttgtacctcgacggatgcttatcaatcataccatgc
ctcgccgaaacgctccgccgtgacgaggctcgctggaaccacatcatcggcacatccata
gggcacacggccgtggggtcgccggacaacggcgaggttatcccggcggagctcgcccac
tcgctggagtacgtcgtcacagttggcttcggcacgccggccatcccgcagaccgtcgtc
atcgacagcggcagcgacttcgcctgggtccagtgcaagccgtgcgactccagcgagtgc
gacccccagaaggaccccctgtttgatccccggaaatcctccacctatgcgcccgtcccc
tgcgactccggcgcgtgcaggaacatctcgtacaacgaggggaacgggtgcacgggcgag
aagctgtgcgggttcgcactgagctacgccgacgcctccaactccaccggcgtgtacagc
agggacaagctgacgctggctcccggcgtcgccgtcgagggcttccgtttcggctgcgcc
cacggccgaggaggctgggacaacatgtccgccggcctgatcgggctcggtaactcgccg
gagtccctcgtgtcgcaggcggcgccgtcctacggcggctccttctcgtactgcctcccg
ccgacggggagctccgcggggttcctcgccctcggcaggccgagcgacacgtccggcttc
gcgttcacccagatgcacccgtcggaccacgtcgccgtgttctacaaggtgacgctcacg
ggcatcagcgtagccggccggccgctcgacgtgcctccctcggcgttcccgcacggagac
tacggcatgatcctcgactccggcacggtcgtcacggtgctgccagcggcgccctacgcg
gcgctgcggacggcattccgtcgcgccatggccgcgtacccgccggcgccgccgatccac
cccgccgacacgtgctacaacctgacgggctacggcaacgtgacggtgccgggcgtggcg
ctgacgttcctgggcggcgcgacggtggagctctacaacccgggggggatcctcgtggag
ggctgcctggcgttcagcgggttgaggcccgacaaccacggcaacggcgtcattggcaac
gtgaaccagcgtgcgttcgaggtgctgtacgatccagtgcagctgagcgttgggttcaga
gccggggcgtgctga
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