Panicum virgatum (switchgrass): 120673123
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Entry
120673123 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT3-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120673123
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120673123
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Motif
Other DBs
NCBI-GeneID:
120673123
NCBI-ProteinID:
XP_039809754
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Position
5N:complement(20085609..20092632)
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AA seq
593 aa
AA seq
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MRKCSGVFLILTLAVVLLLLSPSPSPVPPPTTAATGPVSHLLPSLPGLPDLYPPPANSTA
RLSWGLLRPLLRRSDALPGTAAGVLEAAGAWRNLTLAVAAAAAAGEEGRTGGLSCPASVE
GDLGAGRARIPCGLAEGAAVTVIGVPREGAARFQVEMVGAGGQVLMHVNVSLGAAGMVVE
QNSWAPEEGWGEWERCPLVGDVGHSNSSLQRSLVDGLVRCNEKVGASIIPENNNTMINIT
GNQPEDGQKPKDRSQLSGSFSIVVGEPFTVTVWAGGEGFHMTVNGRHETSFAYRERSEPW
LIAEVKVSGDLELLSFLANGLPVSEEIDMASVALLKAPPLPKKRTFLLVGVFSTGNNFKR
RMALRRTWMQYEAVRSGDVVVRFFSGLHKSEQVNMELWRESQLYGDIQLMPFVDYYSLIT
FKTISICMFGTKIVPAKYIMKTDDDAFVRIDEVISSLKKSNSHGLLYGLISFQSSPHRDK
DSKWFISRKEWPFDMYPPWAHGPGYIISRDIAKFVVRGHQELTLQLFKLEDVAMGIWIQQ
YKRSGQQVNIVTDDRFYSEGCESDYVLAHYQTPRLMMCLWEKLKTDYQAVCCE
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatgctccggcgtgttcctcatcctcacgctcgccgtcgtgctcctcctcctt
tcgccctcgccctccccagtcccgcctcccaccaccgccgccaccggcccggtctcccac
ctcctcccctccctccccggcctccccgacctctaccctccccccgccaactccaccgcc
cggctctcctggggcctcctccgcccgctcctccgccgctccgacgcgctcccgggcacc
gccgcgggcgtcctcgaggccgccggtgcctggcggaacctcaccctggctgtggccgcc
gccgccgcggcaggcgaggaggggcgcactggagggctcagctgcccggcgtcagtggaa
ggggatctgggcgcggggcgtgccaggatcccgtgcgggctcgcggagggcgccgcggtg
acggtgatcggggtgcccagggagggggcggcccggttccaggtggagatggttggtgcg
ggcggtcaggtgcttatgcacgtcaatgtgagcctgggagccgcggggatggtggtggag
cagaattcatgggcgcccgaggaagggtggggggagtgggagcgatgcccgctcgttggt
gatgtcggccacagcaatagcagcttgcagcgaagtctagttgatgggcttgttcgttgc
aatgagaaagtgggtgccagcatcatcccggagaataacaataccatgataaatattact
gggaaccaacctgaagatgggcagaagccaaaagaccgcagtcagttaagtggcagcttc
tcaattgttgtaggagagccttttacagtaacagtgtgggctggtggagaggggttccat
atgacagtaaatggccggcatgaaacatcatttgcctatagagagaggtcggagccatgg
ttgatagcagaagtcaaggtttctggtgatttggagctcttgtcattcttggctaatgga
ttgccagtttcagaagaaatcgacatggctagtgtcgcgcttctgaaggccccacctctg
ccaaagaaacgaacttttctactggttggtgttttctctactggaaacaacttcaagcgg
cggatggctctgaggcgaacatggatgcaatatgaggctgtccgctcaggcgatgtagta
gtccgatttttctctggtcttcacaagagtgagcaagtcaatatggaattatggagagaa
tctcaattgtatggtgacatccaattgatgccctttgttgactactatagtttgatcact
ttcaagaccatatcaatttgcatgtttgggaccaaaattgttcctgcgaagtacatcatg
aaaacagatgatgatgcttttgttaggatcgatgaagtgatctcaagcctgaagaagagc
aactcccatggccttctgtatggtctaatttctttccaatcttcaccacacagagataaa
gatagcaaatggttcatcagtcggaaggaatggcctttcgacatgtatccaccatgggca
catggtccaggttacataatctcacgtgacattgctaagtttgtagtccgaggtcaccag
gaactgactcttcagctattcaaactcgaagatgtggcaatggggatttggatccaacag
tacaagcgcagcggtcaacaagtaaacatcgtgactgatgatagattctacagcgaagga
tgtgagtcggactatgtccttgcccactaccagaccccaaggcttatgatgtgcttgtgg
gagaagcttaagacggattatcaagctgtatgctgtgaatag
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