Panicum virgatum (switchgrass): 120673289
Help
Entry
120673289 CDS
T07260
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2-like
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00510
N-Glycan biosynthesis
pvir00513
Various types of N-glycan biosynthesis
pvir01100
Metabolic pathways
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
120673289
00513 Various types of N-glycan biosynthesis
120673289
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120673289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribophorin_II
Motif
Other DBs
NCBI-GeneID:
120673289
NCBI-ProteinID:
XP_039809997
LinkDB
All DBs
Position
5N:67913318..67919088
Genome browser
AA seq
693 aa
AA seq
DB search
MAGRRPAPAALLVLLLAAAFAPISSAVRPVSDAHRSAAAELFAPSADGSFGDLERTYEAV
RTFQILGLKYKSVTGEACKFAAEKLASPASSATKDLFHAARISGVLGCSVDAGVYDGVVA
RLKAVIKDTNSLLEFYYSVGGLLSIKEQGHNIVLSDAESTFHAIKALSQSDGRWRYDTNS
AESSTFAAGIALEALAGVVALADAEVDPSMVGVVKNDIVKLFDTIKSYDDGTFYFDEKHV
DATEYKGPIMTSASVVRGVTSFATVAPGKLNIPSEKVLGLGKFFLGIGLPGSAKDCFNQI
ESLSFLENNRVFTPLILSLPSKVFSLTSKDQLKVEVTTVFGSAAPPLKVNLVQVLGSDSK
VITSENKELQFDLDNNVHYLDIAPLKIDVGKYSLVFEISLKEPEHESVYATGGRNTENVF
ITGLIKVDKAEIGISDNDAGTVESVQKLDLLKDTKVSLSANHLQKLRLSFQLTTPLGHTF
KPHQVFLKLKHESNVEHLFVVPGSARQFKIVLDFLGLVEKFYYLSGRYDLELAVGDAAME
NSFLRPLGHLELDLPEAPEKAPRPPAQAVDPFSKFGPKAEISHIFRSPEKRPPKELSLAF
TGLTLLPFIGFLIGLVCLGVNLKNFPSLPGPAAFASLFHAGIGAVLLLYVLFWLKLDLFT
TLKYLGFLGIFLVFVGHRTLSYLSSVSTKQKTA
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggccgggaggcgccctgccccggcggccctcctcgtcctcctcctcgccgcggccttc
gctcccatctcatccgccgtccgcccagtatccgacgcgcacagatccgcggccgccgag
ctcttcgccccctccgccgacggatccttcggcgatttggagaggacgtatgaggcggtg
aggacgttccagatactcggattgaagtacaagagtgtgaccggggaggcgtgcaagttt
gccgcggagaagttggcctcccccgcttcatccgctacgaaagatctgttccacgccgcc
cggattagcggcgttctcggatgcagtgttgatgccggcgtgtatgatggtgtcgtcgcg
aggctcaaggcagtgattaaggacaccaactccctgctggagttctactattccgtggga
ggtctgcttagcatcaaggaacaaggacacaacattgttctatctgacgcagagagcaca
tttcacgccattaaggcacttagccaaagtgatgggagatggcgttatgacactaacagt
gctgaatctagcacatttgctgctggtatcgcactagaagctttggcgggtgttgttgct
ctagcagatgctgaggttgatccatccatggtaggagtggtaaaaaatgacattgtgaag
ctgtttgacactatcaagagttatgatgatgggaccttctacttcgatgagaagcatgtt
gatgctactgaatacaagggccctataatgacttctgcttcagttgtacggggtgttacc
tcttttgcaactgttgctcctgggaaattgaatatccctagtgagaaagtacttggcttg
ggaaagttctttcttggtatagggcttcctggtagcgcaaaggactgttttaatcagatt
gagtctttgtcattcctggagaacaatagggtcttcactcctttgatactgtcacttcct
tccaaagtattttcattgacttcaaaagatcagcttaaggttgaagtcacaacagttttc
ggatctgctgcacctccgctcaaagttaatcttgtacaggtgctgggttctgattctaag
gtcatcaccagtgagaacaaggaacttcaatttgaccttgacaacaatgttcattacttg
gacattgctccattgaaaatagatgttgggaaatactctctagtttttgagatttcactt
aaggaaccagagcatgaaagtgtttatgctactggagggagaaacactgagaatgtattt
atcacaggactgatcaaagttgacaaggcagaaattggaatttctgacaatgatgctgga
accgttgagtcagtccaaaagttagatcttctgaaagatacaaaagtatctctttctgca
aaccatctgcagaagttgcgcttgtctttccagctaactacaccgcttgggcacacattt
aaacctcaccaggtgttcttgaagttgaagcatgaaagcaatgttgaacacttatttgtg
gtgccaggttctgcaaggcagttcaaaattgttctagacttcctaggtttggtggagaaa
ttttactacctttctggaagatatgaccttgagcttgcagttggtgatgctgcaatggaa
aattcatttctgcgacctcttggccacttggagttggacctgccagaagccccagaaaaa
gccccgcgccctcctgcacaagctgttgacccattctcaaaatttgggccaaaggcagag
atttcccacatattccgttcaccagagaagaggccacccaaggaactctcacttgcattc
acgggtctcacacttctgccttttatcggattcttgattgggctcgtgtgtcttggagtg
aacttgaagaacttcccatctttgccaggaccggctgcatttgcatcgcttttccatgca
ggaataggagcagtcctgctgctctatgttctcttctggctcaagttggatcttttcaca
actttgaagtaccttggcttcctcggcatcttccttgtgtttgtgggccataggaccctg
tcctacctttcctcagtgtcgacaaaacagaagactgcatag
DBGET
integrated database retrieval system