Panicum virgatum (switchgrass): 120674057
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Entry
120674057 CDS
T07260
Name
(RefSeq) GPI transamidase component PIG-S-like
KO
K05291
GPI-anchor transamidase subunit S
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
120674057
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GFIT
Motif
Pfam:
PIG-S
Motif
Other DBs
NCBI-GeneID:
120674057
NCBI-ProteinID:
XP_039811078
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Position
5N:67608677..67613324
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AA seq
618 aa
AA seq
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MAEIAAGEAPAPPPPAPSTSGEISGGQPASNPASTGSINPPSRTTKPGVKRLVLTASVLL
SFLLGLPFLLKSTEIHRSPLPSDAITALAHRLHSNPPSFPCGLHAVFLRSGSGPSDASLA
SRLERAISAQLQLLPAPSTAGNVSVSVTVESADGCSSSSSSVGSRWQCGVVTTADLVLGD
EVFDELLHSALGSSGGDGSMVYTFVVVEIDDAEEMRVVIGKHRHAWLVGKVDEAKAVSCI
GKVFVKYFMNGGIEEGEKGIGKGEFMPVGSDGNVALSFSLLNADPSGWVYDWEFEKIVER
MLDPVIEALRPIAKINVESQVLYHTPKSSYSYADDKLGGNVLSMGDIPFFVNSNEWHLDT
SISATGRSKVLQFVVYVPSAKECPLYLQLPDGGISKTNAFISPMWGGVLIWNPPDCSPGS
RKTHGTRKKMSSQELMETIEIFIGQLRQLFGLKPSYRSQDMDMSTKFVVSEKGFTEWELD
LLYRHHACSNLLSCLTTLESLSSLVRSLPRMIVMDEIGRQVELSLEAANLAQRNATLGIS
DSSAVSATRARALAEDAFFHPSIMSISYASIEHYFAIYMPFFAPVSLHVLLAAIKELKRY
KAERAKYSAFLASRAASS
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atggcggagatcgccgccggcgaggccccagcgcctcctcctcctgctccttccacctct
ggcgaaatctctggaggccagcctgcttctaatcccgcctccaccggcagcatcaacccg
ccgtcgcgcacgacgaagcccggcgttaagcgcctcgtcctcaccgcctccgtcctcctc
tccttcctcctcggactgcccttcctgctgaaatccaccgagatccaccggtcgccgttg
ccttccgacgcaatcaccgccctcgcccaccgccttcactccaatccgccatccttcccc
tgcggcctccacgcggtcttcctccggtccggttccggcccctccgatgcctccctcgcc
agtcgcctcgagcgagcgatctcagcccagctccagctcctcccggccccttccactgct
ggtaatgtctcggtatcagtcaccgtcgagtcggctgatggctgctccagcagcagcagc
agcgttggttcccgttggcaatgcggtgttgtgaccactgcggacctggtgcttggtgac
gaggtgtttgatgaattgcttcactcggcactgggcagcagcggtggggacgggtcaatg
gtttacacttttgtggttgtggaaattgatgatgcggaggaaatgagggttgttatcggg
aagcatcggcatgcttggctggttggaaaggttgacgaagctaaggctgtgtcgtgtatt
gggaaggtatttgtcaagtatttcatgaatggcggtattgaggagggtgagaaaggcatt
gggaagggcgagttcatgccagttggatcagatggaaatgttgctctatcttttagcttg
ttgaatgctgatccaagtggttgggtgtacgattgggagtttgaaaagattgttgagagg
atgttggatcctgtgattgaggcactgcgaccgattgcgaaaattaatgtagagagtcag
gttttgtaccacactcctaagtcgtcctattcatatgctgatgataaactgggtggcaat
gtccttagtatgggagacattcctttctttgtaaattcaaatgagtggcacttggataca
tcaatttcagctacaggacgatcgaaagttcttcaatttgtggtatacgttccatctgca
aaggaatgcccattgtacttgcaacttcctgacggtgggatttcaaaaactaatgcattt
atatcccctatgtggggaggtgttcttatctggaacccaccggactgttcacctggttcc
aggaaaactcacggtacccggaagaaaatgtcatctcaggaacttatggagactattgaa
atcttcattggacaactaaggcagttgtttggtctaaaaccatcttatcgctcacaagat
atggacatgtcaacaaagtttgtagttagtgaaaaggggttcacagaatgggagttagat
ttactatatcgacatcatgcatgttccaatctgttgtcatgtctcaccaccttggagtct
ctatccagtctggtccgttctctcccaagaatgattgtcatggatgaaattggaagacag
gttgagctttctcttgaagctgcaaatttagctcaaagaaatgcaactctaggaataagt
gactcttcagcagtatctgcaacaagagcgagggcattagctgaggatgcatttttccac
ccatctattatgtcaatcagttatgcttcaattgagcattattttgcgatttacatgcca
tttttcgcaccggtttccctgcatgtgctgctggcggcaatcaaggagctgaaacgttac
aaggcagagcgagcaaaatattcagcatttcttgcttcccgggcggcatcctcctga
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