KEGG   Panicum virgatum (switchgrass): 120674120
Entry
120674120         CDS       T07260                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120674120
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120674120
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     120674120
SSDB
Motif
Pfam: HD HD_assoc_2 GyrB_insert
Other DBs
NCBI-GeneID: 120674120
NCBI-ProteinID: XP_039811175
LinkDB
Position
5N:complement(11330818..11344227)
AA seq 491 aa
MGEYCASPESPAAAAALTFPSQTPAAAAAAAVARPRYGSCDRRFVKQVFDNLHGSISLDP
LALQFVDTEEFQRLRDLKQLGLTYLVYPGAVHTRFEHSLGVYSLAGKAMNNLKTYQGEEL
GIDRIDMQTVKLAGLLHDIGHGPFSHLFEHEFLPRVDPGSTWSHEKMSALLLDSIVDKHA
IDIEDDYLKMVKEMIIASSKSATTKSAKDKHFLYDIVANGRNGIDVDKFDYIDRDCRACG
LGSNFQYWRLMEGMRVMGDEICYPAKDYLSIHKLFSTRADLHRTVYTHAKVKAVELMLVD
ALIEANDYLGISLHANDPEDFWKLDDTIIKSIETAPNNELKKAKEIIQRIRRRELYKFCN
QYSVPKDKLEHFKNITSQDIVCSQKSSGVLLKEEDIAVSNVKIDLTRGKDNPLESIKFFK
DFGCDEKFPITDDRVSHLLPAYNEDRIVRVYAKKPELVEAVSEAFENLQLRMYGEKTQVH
DTPKKKRMRSL
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgggcgagtactgcgcttccccggagtcccctgcggcggcggcggccctgacgttcccc
tcccagacccctgcggcggcggcggcggcggcagtggccaggccgcggtacgggagctgc
gaccgccggttcgtgaagcaggtgttcgacaacctgcacgggagcatctcgctcgacccg
cttgctctgcagtttgtggacaccgaagagtttcagaggttgcgggacctaaaacaactt
ggtcttacatatctggtctatcctggagctgttcacacacgctttgaacattcattagga
gtttattcgttagctgggaaggctatgaacaatcttaaaacgtatcagggagaagagctt
ggtattgatcgtatcgacatgcaaactgtgaagcttgcaggactcttgcatgatattgga
catggccccttcagtcatttgtttgagcatgagtttcttcctcgtgttgatcctggctca
acctggtcccacgaaaagatgtcagcactgttgttggacagtatcgttgacaaacatgca
atagatatagaagatgattatctgaaaatggtcaaggagatgataattgccagctctaag
tctgccaccacgaaaagtgcaaaggataagcattttctttatgacattgttgctaatggc
cgcaatggcatcgatgttgacaagttcgactacattgaccgtgattgcagagcatgtggt
cttggctctaatttccagtactggaggttgatggagggcatgcgagtgatgggtgacgaa
atttgctaccctgccaaagattacttgagcatccataaattgttttcaacacgtgctgat
ctgcaccggactgtctacacccacgccaaagtaaaggctgttgaactcatgctcgtggat
gcactcatcgaggctaatgattacttgggaatatcattgcacgcaaatgatccagaagat
ttttggaagttggatgacacaatcattaaaagcattgaaactgcccccaataatgaactg
aagaaagcgaaagaaatcattcaacgtattcgccgaagagaactctacaagttttgcaat
cagtattcggttccaaaggacaaactggagcatttcaaaaatataacttcacaggacata
gtttgttcacagaaatcttctggggtgctgctgaaggaagaggacattgctgtcagcaat
gttaagattgatcttactcgtggaaaagataaccctcttgaaagcatcaagttctttaag
gattttggatgtgacgagaagttccccatcacagatgaccgggtcagccacttgctacct
gcctacaatgaagatagaattgtgagggtctatgctaagaagcctgagctggtggaagcg
gtgtcagaagcctttgagaacctccaactcagaatgtatggtgagaagactcaagtgcac
gatacacccaagaagaagcggatgagatccctttag

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