Panicum virgatum (switchgrass): 120674817
Help
Entry
120674817 CDS
T07260
Name
(RefSeq) syn-copalyl diphosphate synthase, chloroplastic-like
KO
K14043
syn-copalyl-diphosphate synthase [EC:
5.5.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00904
Diterpenoid biosynthesis
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00904 Diterpenoid biosynthesis
120674817
Enzymes [BR:
pvir01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.14 syn-copalyl-diphosphate synthase
120674817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Terpene_synth
Motif
Other DBs
NCBI-GeneID:
120674817
NCBI-ProteinID:
XP_039811867
LinkDB
All DBs
Position
2K:37677300..37682731
Genome browser
AA seq
756 aa
AA seq
DB search
MLAFTTELLNVPLLRQLTPGVQQPRQPFLQLHPRRRPCGPALISKSPYSESGKAREQTVD
GHFEQKDEPSEMASMVDAIRTALRSIGEGEITISAYDTAMVALLKNPDGGDAPLFPSTID
WIIQNQLPDGSWGDEAFFMIRDRIISTLACVVALKTWNIHADKCERGQLFIKENMWRLAH
EEEDWMLVGFEIALPSLLDMAKDLDIDIPYNEPALEAIYAERKRKLAKIPRDVLHAMPTT
LLHSLEGMVDLDWEKLLKLRCLDGSFHCSPASTATAFKETGDKKCFEYLDGMVQKFNGGV
PCIYPLDVYERLWAVDRLTRLGISRHFTSEIEDCLDFIYRNWTPEGLAHTKNCPVKDIDD
TAMGVRLLRLHGYQVDPCVLKHFEKDGKFFCLHGESNPSSVTPMYNTYRVAQLKFPGDDD
VLRRAEVFCREFLIERRGSNRMKDKWAIAKDIPGEVEYAIDFPWKASLPRIETRMYLDQY
GGSGDVWIGKVLHRMTLFCNDLYLKTAKADFCNFQRNCRMEWNGLREWYFRSNLEKYGGT
PKSALTAYFLASANIFEPKRAAERLGWARTAVLAAAVSSHLRRIGGAKNSTEDLEDLINL
VPFEGGASASLRDAWKQWLMSWTAKGSRQGSIEGDTALLLVRTIEIFSGRHVSTEQKLSL
WEYCQLEQLTSSICSKLSRRVLAQNGKTIENTEDLDRQVDLEMEELAQRVLQGSSALNKE
TRETFLHVVKSFCYVAHCPPEKIDNHIDKVIFQDVV
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgctggcgtttactacagaactcctgaatgttcccttgcttcgccagctgacgcccggc
gtgcaacagccacggcagcctttcctacagctgcaccctcgccgtcgaccatgtgggccc
gcgctaataagcaaatcgccatactcggagtcaggaaaagcccgggaacagacagttgat
ggacattttgaacaaaaggatgaaccaagcgaaatggcaagcatggttgatgccatcaga
acagcattgaggtcgatcggagagggtgagattaccatttcagcctatgacacggcaatg
gtagcccttctcaagaacccagatgggggtgatgcgccactgttcccatcgaccattgac
tggatcatccagaatcagctacccgatggttcatggggcgatgaagccttcttcatgatc
agagacaggatcatcagcaccctagcatgtgttgtggcattgaagacttggaacatccat
gccgacaaatgcgagagaggtcagttatttatcaaagaaaatatgtggaggttggcacat
gaggaagaggactggatgctagtcggattcgagattgccttgccctcactcctagacatg
gccaaggatcttgacattgacatcccttacaacgagccagccctggaagcaatatatgca
gaaagaaaaagaaaacttgccaagattccgagggatgtactacacgctatgccaacgact
ctgctacacagcttagagggaatggtagacttggactgggaaaagctccttaagctccgg
tgtctcgatggatcctttcattgttcacctgcttcaacagctactgctttcaaggaaaca
ggagacaagaaatgcttcgagtaccttgatggaatggtccaaaaatttaatggcggagtg
ccatgtatctaccctttggatgtgtatgaacgcttatgggctgttgatcggttgacaagg
ttgggcatatcaaggcacttcacaagcgaaattgaggattgcttagactttatttacagg
aattggactcccgagggattagctcatacaaagaactgcccggtaaaggatatcgatgac
acagccatgggtgttcgtctcctccgacttcatggctaccaagtcgacccatgtgtgttg
aaacacttcgagaaggacggcaagttcttctgcttgcacggggagtcgaacccatcttct
gtcacccccatgtacaatacttatcgggttgcccagctcaaatttcctggcgatgacgac
gtccttcggcgggctgaggtattttgccgtgaattcctcattgagaggagaggctctaac
aggatgaaggacaaatgggcaatcgcaaaggacataccaggggaggtcgaatatgccatt
gacttcccatggaaagcaagcttgccacgaattgaaacgaggatgtacttggatcaatat
ggaggtagtggtgatgtctggatcgggaaggttctccacaggatgactctcttctgcaat
gatctttatctcaagacagccaaagctgacttctgtaatttccaaagaaactgccgaatg
gagtggaatggtcttagagagtggtatttcaggagtaatcttgagaagtatggtgggacc
ccaaagagtgcattgacagcttacttcttagcttccgcgaatatattcgagccaaagcga
gctgcggaacgtcttggatgggcccgcacagcagtgcttgctgcggccgtctcctcgcac
ttgcggagaattgggggagcaaagaattcgaccgaggaccttgaagatcttatcaacctt
gttccattcgaaggcggtgcttctgccagtcttcgtgatgcgtggaagcagtggctcatg
tcatggactgcaaaggggagccggcagggatcaattgaaggggatacagcactgttgtta
gttcggaccatcgaaattttctcaggaaggcatgtttcgaccgagcaaaagctcagcctc
tgggagtattgtcagctcgagcagctcacctcctccatctgctccaaactttcgaggagg
gttcttgctcagaatggaaaaactatcgagaacactgaggacctagaccggcaagtggat
ttggagatggaagaattggctcagcgtgttctccagggcagcagcgcactcaacaaagag
actagggagacatttctccatgtggtgaagagcttctgctacgttgcccattgccctcct
gaaaaaattgataaccacatcgataaggtcatattccaggatgtcgtttag
DBGET
integrated database retrieval system
