Panicum virgatum (switchgrass): 120676242
Help
Entry
120676242 CDS
T07260
Name
(RefSeq) auxin efflux carrier component 3a-like isoform X1
KO
K13947
auxin efflux carrier family protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120676242
Transporters [BR:
pvir02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
120676242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mem_trans
Motif
Other DBs
NCBI-GeneID:
120676242
NCBI-ProteinID:
XP_039813407
LinkDB
All DBs
Position
5N:48607220..48612886
Genome browser
AA seq
678 aa
AA seq
DB search
MPSSQDRKSPLLHVTQILHPESATIPLAFHSRRSRTRGRIPTEPFSLLRQRPPAAPGVGQ
AKMISWKDFYTVLTAMVPLYVAMILAYGSVRWWRIFTPDQCSGINRFVAIFAVPLLSFHF
ISTNDPYAMNLRFLAADTLQKLLVLAALAVWSRLPSSSLGGGAPRLDWSITLFSVSTLPN
TLVMGIPLLVAMYGPYAGSLMVQVVVLQCIIWYTLLLFLFEFRAARMLIADQFPDTAAAI
ASLHVDPDVVSLEGGRAETEAEVAEDGRLRVTVRRSSASRRSLLMVTPRPSNLTGAEIYS
MSSSRQHSPRGSNFNHADFFAMVDGAPPPPTPAGARGSSFGAGEVYSMHSSRGPTPRQSN
FDEHSASAQSSKPAAAVVPSCHDAKELHMFVWSSSASPVSEVSGLPVFAGGAGVNIGAKE
IRMVVPADLPQNGSAGKESEDNGEVAAAAVEGEAFRFSGGKTVEDAEAGEAGAPDGLSKL
GSSSTAELRGKDVDVAADGGGRSGAPQMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLA
WSLIAFRWHISMPAVVAKSISILSDAGLGMAMFSLGLFMALQPNLIACGWRATGISMGVR
FLAGPAVMAAASLAIGLRGTLLQIAIVQAALPQGIVPFVFAKEYNVHPAILSTMVIFGML
VALPITLLYYIVLGLGPV
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgccgagttcacaagacaggaagagcccactcctgcatgtaactcagatactccaccca
gagtccgcgaccattcctctcgccttccactccagaagaagccggacaagaggcaggatc
ccgaccgagcccttctccctcctccgtcagcggccgccagcagcgccgggggtgggccaa
gccaagatgatatcgtggaaggatttctacacggtgctgaccgcgatggtgccgctgtac
gtggccatgatcctggcgtacgggtcggtgcggtggtggcgcatcttcacgccggaccag
tgctccggcatcaaccgcttcgtcgccatctttgccgtgccgctgctgtccttccacttc
atctccaccaacgacccctacgccatgaacctccgcttcctggcggcggacacgctgcag
aagctactcgtcctggcggcgctcgccgtgtggtcgcgcctgccctcctccagcctcggc
ggcggcgcgccgcggctggactggtccatcacgctcttctcggtgtccacgctgcccaac
acgctggtgatggggatcccgctgctggtcgccatgtacgggccctacgccggctccctc
atggtccaggtcgtcgtgctccagtgcatcatctggtacacgctgctgctcttcctcttc
gagttccgcgccgcgcggatgctcatcgccgaccagttcccggacaccgcggcggccatc
gcgtcgctgcacgtggaccccgacgtggtgtcgctggagggcggccgcgccgagacggag
gccgaggtggcggaggacggccggctgcgcgtcacggtgcgccgctcgtccgcgtcgcgg
cggtcgctgctgatggtcacgccgcgcccgtcgaacctgacaggtgcggagatctactcg
atgagctcgtcgcggcagcacagcccgcggggctccaacttcaaccacgccgacttcttc
gccatggtcgacggcgcgccgcccccgccgacgcccgcgggcgcgcgcggctcgagcttc
ggcgccggcgaggtgtactccatgcactcgtcccggggcccgacgccgcggcagtccaac
ttcgacgagcactcggcctcggcgcagtcgtcgaaacccgcggcggcggtcgtgcccagc
tgccacgacgccaaggagctgcacatgttcgtgtggagctcgagcgcctcccccgtctcg
gaggtcagcggcctgccggtgttcgccggtggcgcgggcgtcaacatcggcgccaaggaa
atccgcatggttgtccccgccgacctgccgcagaacggctcggccggcaaagagagcgag
gacaacggtgaagtggcggcagccgctgtggaaggcgaggcgttccgcttcagcggcggc
aagacggtggaggacgccgaggccggggaggccggcgccccggacgggctgtcgaagctg
gggtccagctcgacggccgagctgcgcgggaaggacgtggacgtggcggcggacggcggc
gggcgctcgggggcgccccagatgccgccggcgagcgtgatgacccggctcatcctcatc
atggtgtggcgcaagctgatccgcaaccccaacacgtactccagcctcatcggtctcgcc
tggtccctcatcgcgttccggtggcacatctccatgccggcggtcgtggccaagtccatc
tccatcctctcggacgccgggctgggcatggccatgtttagcctgggattgtttatggcg
ctgcagccgaacctcatcgcctgcgggtggcgcgccaccggcatctccatgggcgtccgc
ttcctcgccggcccggccgtcatggccgccgcgtccctcgccatcggcctccgcgggacg
ctcctgcagatcgccattgtgcaggcagctctaccgcaagggatcgtgccctttgtgttc
gccaaggaatacaacgtccacccggccatcctcagcaccatggtaatctttggaatgctg
gtagccctgccgatcacccttctctactacatcgttctcggactgggaccagtatag
DBGET
integrated database retrieval system
