Panicum virgatum (switchgrass): 120677637
Help
Entry
120677637 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT2-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120677637
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120677637
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
120677637
NCBI-ProteinID:
XP_039814735
LinkDB
All DBs
Position
6N:3984631..3988987
Genome browser
AA seq
643 aa
AA seq
DB search
MARRVRPSHLVLALGAAYLLLVSLKFRRVLDLAAADLAGDPAAAFSSPSSSDHLPPGGSR
NATATSTSTPAFPVQPFWHRYDHVALPDPAAARASRGGRTALDRMADDAWALGLAAWEEA
AAFAGDPWALLASATARASDASRCPSAVSQRARGRVVFLPCGLAAGSSVTVVGTPRAAHR
EFVPQLARMRQGDGTVMVSQFMVELQGLRAVDGEEPPRILHLNPRLRGDWSQHPILEHNT
CYRMQWGAAQRCDGTPTDDNDDKVDGFPKCEKWIRNDIVDTKESKTTSWLKRFIGRAKKP
AMTWPFPFVEERLFVLTVQAGVEGFHIYVGGRHVTSFPYRPGFTLEEATGLFVKGDVDVH
SVYATALPMSHPSFSLQQVLDMSEKWRSRPLPKRPISLFIGILSASNHFAERMAVRKTWM
QTPEIKSSEAVARFFVALNSRKEVNVMLKKEAEYFGDIVILPFIDRYELVVLKTIAICEY
GVQNLTAANIMKCDDDTFVRVDVVLRHIKLNNGGKPLYVGNLNLLHRPLRTGKWAVTDEE
WPEDIYPPYANGPGYVISGDIAKFIVSQHANQSLRLFKMEDVSMGLWVEKFNSTTPVQYS
HSWRFCQYGCLENYYTAHYQSPRQMLCLWDKLIRGRASCCNYR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcgggtgcggccgtcgcacctggtgctggcgctgggggccgcgtacctcctc
ctcgtctccctcaagttccgccgcgtgctcgacctggccgccgccgacctcgcgggcgac
cccgccgccgccttctcctcgccctcctcctccgaccacctgcccccgggcggctcccgc
aacgccaccgccacctccacctccacccccgccttccctgtccagcccttctggcaccgc
tacgaccacgtcgcgctcccggaccccgccgcggcgcgcgcgtcccgcggcggccgcacc
gcgctcgaccgcatggccgacgacgcctgggcgctcggcctcgccgcctgggaggaggcc
gccgccttcgcgggggacccctgggcgctgctcgcctccgccactgcccgcgcctccgac
gcctccaggtgcccctccgccgtctcccagcgcgcgcgcggccgggtcgtcttcctgccc
tgcggcctcgccgcgggctcctccgtcaccgtcgtcggcaccccgcgcgccgcgcacagg
gagttcgtgccgcagctcgcgcggatgcgccagggggacggcaccgtcatggtctcgcag
ttcatggtcgagctccagggcctgcgcgccgtcgacggggaggagccgcccaggatactg
cacctcaaccccaggctcaggggggactggagccagcaccccatcctcgagcacaacacc
tgctacaggatgcagtggggcgccgcgcagcgctgtgacgggacgccaaccgacgacaat
gacgacaaggttgatgggttccccaaatgtgagaaatggatacgtaatgatattgttgac
accaaggagtccaagacaacttcatggttgaagagattcatagggcgtgcaaagaaacct
gccatgacatggcctttcccctttgtagaggagaggctgtttgttttaactgtacaggct
ggagttgaaggtttccacatttacgttggtggtcgacatgtgacatcttttccatatcga
ccaggtttcactcttgaagaagcaacaggattatttgttaagggcgatgtggatgtacat
tcagtttatgccactgctcttcctatgtcccatcctagtttttctcttcaacaagtcctt
gatatgtcagaaaagtggaggtcccggccactcccaaaacgtcctatttcccttttcatt
ggaatattgtctgcgtcgaatcattttgctgagcgcatggctgtgagaaaaacatggatg
cagactccagaaattaagtcttcggaagcagtagctcgattctttgttgcactgaattca
aggaaagaggtcaatgtaatgctgaagaaagaagcagaatactttggagacattgtaatt
ttgccatttatagatcgttatgagctggtggttcttaagacaattgctatttgtgagtat
ggggtccagaacttgactgctgcaaacataatgaaatgcgatgatgatacatttgttagg
gtagatgtggttctgagacacatcaagctgaacaacggtggcaaaccgttgtatgtgggg
aacctgaacctcttgcacagaccattgagaactggaaaatgggcagttacagatgaggaa
tggcctgaagatatctacccgccttatgcaaacggaccgggctatgtaatttctggtgac
atagcaaaattcatcgtatctcagcatgccaaccagagtttaagactatttaagatggaa
gatgtaagtatgggtctatgggttgaaaaattcaattccacgacacctgttcagtattcc
cacagctggaggttctgccagtacggttgcctggagaactactacacggcccactatcag
tcgcctaggcagatgctgtgcttgtgggataagttgatccgcggtcgggcatcctgctgt
aactacagatag
DBGET
integrated database retrieval system
