Panicum virgatum (switchgrass): 120678492
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Entry
120678492 CDS
T07260
Name
(RefSeq) tonoplast dicarboxylate transporter-like
KO
K14445
solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120678492
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC13: Human Na+-sulfate/carboxylate cotransporter
120678492
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Gene cluster
GFIT
Motif
Pfam:
Na_sulph_symp
CitMHS
PDR_CDR
Motif
Other DBs
NCBI-GeneID:
120678492
NCBI-ProteinID:
XP_039815633
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Position
6N:46867396..46870061
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AA seq
539 aa
AA seq
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MGKRGSLDGGSSADDVEAPLLLGAGDGERPAAWVRALLAHGYPAVASGPAACAAVCALVD
LGGAHRGARNMLAVLAWVFLWWVTGAVPLAVASMAPLFLFPLFGVAGADAVAKAYMDDVI
SLVLGSFILALAIEHYQIHRRLALNITSLFCGDPVRPPLLLLGITGTTFFLSMWIHNTAC
TVMMMPVATGILQRLPRGGDGAEETGCQEEEVRRFSKAVVLGVVYASAIGGMATLTGTGV
NIILVGMWSTYYPEQEPITFSSWMSFGLPMALIIFFTLWVTLCLMYCTKNTGKALSAYLD
RSHLRRELTLLGPMAFAEKMVLAVFGGLIVLWMTRTLTDDIPGWGALFHNNVGDGTVTIM
MATLLFIIPSGKNNGERLMDWNKCRKLQWDIILLLGAGFAVADGFSSSGLTDILSDGLRF
LKDAPTMVIVPVACIVSAVITEFTSDDATTTLVLPLFAELAKSINVHPALLMISGAVGAQ
LSYLLPTGSPSNVVGFSSGHITIKDLVVTGMPLKIVGIASLTILLPSLGPHIFGIDSRS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagcgcggcagcctcgacgggggctcgtcggccgacgacgtggaggcgccgctg
ctgctcggagccggcgacggggagcggccggcggcgtgggtgcgcgcgctgctcgcgcac
gggtacccggcggtggcgtcgggccccgcggcgtgcgcggcggtgtgcgcgctcgtcgac
ctcggcggggcccaccgcggcgcgcgcaacatgctcgccgtgctcgcgtgggtgttcctc
tggtgggtcaccggagccgtgccgctggcggtcgcgtccatggcgccgctcttcctcttc
ccgctcttcggcgtcgccggcgccgacgccgtcgccaaggcctacatggacgacgtcatc
tcgctcgtcctcggcagcttcatcctcgcgctcgccatcgagcactaccaaatccaccgc
cgcctggccctcaacatcacgtcgctgttctgcggggacccggtgcggccgccgctgctg
ctgctgggcatcaccggcaccaccttcttcctcagcatgtggatccacaacacggcgtgc
acggtcatgatgatgccagtggcgacggggatcctgcagaggctcccgcggggcggcgac
ggcgccgaggagaccggatgccaggaggaggaggtgcgccggttctccaaggcggtggtg
ctcggcgtggtgtacgcgtcggccatcggagggatggcgacgctgactggcaccggcgtc
aacatcatcctggtcgggatgtggtccacctactaccccgagcaggagcccatcaccttc
agctcctggatgtccttcgggctgcccatggcgctgatcatcttcttcacgctctgggtc
accctctgcctcatgtactgcaccaagaacactggcaaggcactctctgcttacctggac
agaagccatctgagaagagagcttaccttgttaggtccaatggcttttgcagagaagatg
gtcttggctgtgtttgggggtctaattgtgctatggatgaccaggaccctgacagatgac
ataccagggtggggagctctcttccacaacaacgttggagacggaacagtcactatcatg
atggctacactgctcttcataatcccaagcggaaagaacaatggcgagagactgatggac
tggaacaagtgcaggaagctccagtgggacattatcctcctcctcggtgcaggcttcgcc
gttgctgacggcttcagctcaagtggcctgactgatatcctctctgacgggctcaggttc
ctgaaggacgcaccgacgatggtcattgttcctgtggcctgcattgtcagtgcggtcatc
acagagttcacgtctgacgatgcaaccacgacgctggtgctgcctctgttcgctgagttg
gcgaagtctatcaatgtgcacccagcattgcttatgatttctggagcagttggggctcag
ctgtcatacttgttgcccaccggatcaccgtcaaacgttgttgggttcagtagtggccac
attaccatcaaggatcttgttgtcaccgggatgcccctgaagattgtcggaatcgcatct
ttgacaatcttgctgccaagtttaggaccacacatttttggcatagacagcaggtcctag
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