Panicum virgatum (switchgrass): 120678913
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Entry
120678913 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit B-11-like
KO
K08065
nuclear transcription Y subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120678913
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120678913
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Motif
Other DBs
NCBI-GeneID:
120678913
NCBI-ProteinID:
XP_039816292
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Position
6N:complement(8433571..8436645)
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AA seq
257 aa
AA seq
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MKSRKGYGQQGHLLSPVGSPPSDNESGAAAAAAAAGCGSSAGYGGGGGGDSPAKELDRFL
PIANVSRIMKRSLPANAKISKEAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDLL
WAMTTLGFEAYVGPLKSYLNRYREAEGEKAAVVGARHGDGAADDAPLGAGAVAAPGDRAG
HHDAAGGSADVGLMMGVGGGFGAGGGTSSYYAAAAAGRAYGGDGPKVVEFDGEEAENGRG
MQRGFGGSGHLHGAVQW
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaggaagggctacgggcagcagggccacctgctgagcccggtgggcagcccg
ccgtcggacaacgagtccggcgcggcggccgctgcggcggcggccgggtgcgggagcagc
gcggggtacggcggcggcggcggcggggactcgccggccaaggagctggaccggttcctg
ccgatcgcgaacgtttcgcgcatcatgaagcggtcgctgccggcgaacgccaagatctcc
aaggaggccaaggagacggtgcaggagtgcgtgtcggagttcatcagcttcgtcaccggg
gaggcctccgacaagtgccagcgcgagaagcgcaagaccatcaacggcgacgacctgctc
tgggccatgaccacgctcggcttcgaggcctacgtcggcccgctcaagtcctacctcaac
cgctaccgcgaggccgagggcgagaaggccgccgtggtcggcgcgcggcacggcgacggc
gccgcggacgacgccccgctcggcgcgggcgccgtcgccgcgcccggtgaccgcgcgggc
caccacgacgccgccggcggctcggcggacgtcgggctcatgatgggggtcggcggcggg
ttcggcgcgggcggcgggacgtcgtcgtactacgcggcagcggcggctgggagggcgtac
ggcggggacgggccgaaggtggtggagttcgacggcgaggaggccgagaacggccgcggc
atgcagagggggttcggcggcagcggccacctccacggcgccgtgcaatggtga
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