Panicum virgatum (switchgrass): 120680124
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Entry
120680124 CDS
T07260
Name
(RefSeq) alpha-amylase isozyme 3D-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120680124
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
120680124
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Motif
Pfam:
Alpha-amyl_C2
Alpha-amylase
Glyco_hydro_70
Motif
Other DBs
NCBI-GeneID:
120680124
NCBI-ProteinID:
XP_039817680
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Position
6N:44084660..44086759
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AA seq
434 aa
AA seq
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MKHSSKFCLLFSLVVVALCSLVQAQVLFQGFNWESYKKQGGWYNSLKAQVDDIAKAGVTH
VWLPPPSHSVAPQGYLPGRLYDLDASRYGTAAELKSLIAAFHGRGIQCVADVVINHRCAE
KKDARGVYCIFEGGTPDDRLDWGPGMICSDDTQYSDGTGHRDTGEGFAAAPDIDHLNPRV
QRELTGWLNWLKSDVGFDGWRLDFAKGYSPAIAKMYVETTRPSFVVAEIWNSLSYTDGKP
SPNQDQCRQELVDWVDAVGAPAMAFDFTTKGLLQAGVQGELWRLRDGSGKAAGLIGWTPE
KAVTFVDNHDTGSTQKLWPFPSDKVMQGYAYILTHPGVPCIFYDHMFDWNLKQEISTLAA
IRARNGIHAGSKLRILLADADAYVAVVDEVVMVKIGTRYDVSSVIPSDFHPAAHGKDYCV
WEKGSLRVPAGRHL
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaagcactcgagcaaattctgcttgctcttctccctcgtggtcgtggccctctgcagc
ctggtccaggcacaggtcctcttccaggggttcaactgggagtcgtacaagaagcagggc
ggctggtacaacagcctcaaggcccaggtcgatgacatcgccaaggccggcgtcacgcac
gtctggctgcctcctccctcgcactccgtcgccccacaaggttacttgccggggcgcctg
tacgacctggacgcgtcgaggtacggcacggcggcggagctcaagtccctgatcgcagcg
ttccacggcaggggcatccagtgcgtcgccgacgtcgtcatcaaccaccggtgcgcggag
aagaaggacgcgcgcggcgtctactgcatcttcgagggcgggacgcccgacgaccgcctc
gactggggccccggcatgatctgcagcgacgacacgcagtactcggacggcacgggccac
cgcgacaccggcgaggggttcgccgcggcgcccgacatcgaccacctcaacccgcgcgtc
cagcgggagctcaccggctggctcaactggctcaagtccgacgtcggcttcgacggctgg
cgcctcgacttcgccaagggctactcccctgccatcgccaagatgtacgtggagaccacc
aggccgagcttcgtcgtggccgagatatggaactccctgagctacacggacggcaagccg
tcgcccaaccaggaccagtgccggcaggagctggtggactgggtggacgcggtcggcgcg
ccagccatggcgttcgacttcacgaccaaggggctgctgcaggcgggcgtgcagggggag
ctgtggcggctgcgcgacggctccggcaaggcggccggcttgattgggtggacgccggag
aaggccgtcacgttcgttgacaaccacgacaccgggtcgacgcagaagctctggccgttc
ccgtccgacaaggtgatgcagggctacgcctacatcctcacgcatccaggggttccctgc
atcttctacgaccacatgttcgactggaatctgaagcaggagatatcgacgctggccgcg
atccgggctcgcaacggcatccacgccgggagcaagcttcgaatcctcctggcggacgcc
gacgcgtacgtggccgtcgtcgacgaggtggtcatggtgaagatcgggacgaggtacgac
gtgagcagcgtgatcccgtcggatttccaccccgcggcgcacggcaaggactactgcgtc
tgggagaaggggagcctccgcgtcccggcagggcgccacctttag
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