Panicum virgatum (switchgrass): 120681318
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Entry
120681318 CDS
T07260
Name
(RefSeq) isocitrate dehydrogenase [NADP]-like
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00020
Citrate cycle (TCA cycle)
pvir00480
Glutathione metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01210
2-Oxocarboxylic acid metabolism
pvir01230
Biosynthesis of amino acids
pvir04146
Peroxisome
Module
pvir_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvir_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
120681318
09106 Metabolism of other amino acids
00480 Glutathione metabolism
120681318
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120681318
Enzymes [BR:
pvir01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
120681318
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GFIT
Motif
Pfam:
Iso_dh
Motif
Other DBs
NCBI-GeneID:
120681318
NCBI-ProteinID:
XP_039818758
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Position
7N:45405811..45418882
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AA seq
625 aa
AA seq
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MSVKCMNALYHLQTLQAKAMSQIIASARTSHEIVIAKNEQTRDLDVHVGQLEGLIEERDV
LLDNRDVDFALLEQQFTAQQIQLNAAFDHIEILEAQQAQPEAMEEEPQEVQVTPSSSLTH
AGVLRAPSPARTLPTRRVLLEVLGLWDAPPGPAPAPPPPLLPRHGSRFGLQLRGGSPLPS
LLPARRLPAPGSGGAFRGISLRCYAAAAAAVAEQGRIKVQNPIVEMDGDEMTRVIWSMIK
DKLIFPYLELDVKYYDLGILNRDATNDEVTVESAEATLKYNVAVKCATITPDETRVKEFK
LKSMWRSPNGTIRNILNGTVFREPILCKNIPRILSGWKKPICIGRHAFGDQYRATDMIID
GPGKLKMVFVPEGAEAVEFDVYDFKGPGVALSMYNVDESIRAFAESSMAMALSKRWPLYL
STKNTILKKYDGRFKDIFQEVYEESWKEKFEENSIWYEHRLIDDMVAYAVKSEGGYVWAC
KNYDGDVQSDFLAQGFGSLGLMTSVLLSSDGKTLEAEAAHGTVTRHFRLHQKGQETSTNS
IASIFAWTRGLEHRAKLDKNDRLLDFTHKLESACVETVESGNMTKDLALLIHGPKVSREF
YLSTEEFIDAVAQQLRGKIQTPAAV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtgaagtgcatgaatgcactctaccacttgcagactttacaggccaaggccatg
agccagatcattgcttctgcacggaccagccatgagatagtgattgctaagaatgagcag
accagggatctggatgtccatgttggccaactggagggtctaattgaggagcgtgatgtt
ctcttggacaacagggatgttgactttgcacttctggagcagcagttcaccgcccaacag
attcagctaaatgctgcctttgatcacattgagatattggaggctcagcaggcccagcct
gaggccatggaggaggagccccaggaggttcaggttaccccctcctccagtctcacccac
gccggcgtcctccgtgccccctcaccggcacgcacgcttcccacgcgccgcgtgctcctt
gaagtgctcggcttgtgggatgcgccacctggtcctgctcctgccccgccgcctcctctc
ctccctcgccatggctcgcgcttcggtctccagctccgcggcgggagccccctcccttcc
ctgctccccgcgcgccgcctccctgcccccgggagcggcggcgcgttccgcggcatctcg
ctccggtgctatgcagccgccgccgccgcggtggccgagcagggccgcatcaaggtccag
aaccccatcgtcgagatggacggggatgagatgacgcgggtcatttggagtatgataaag
gataagctcatcttcccgtatctggagctggatgtgaagtactatgatcttggaattctc
aacagggacgccaccaacgatgaggtcaccgtggagagtgcagaggctacattgaagtat
aatgtagctgttaagtgtgcaacaatcactcctgatgagactagagtcaaagagttcaaa
ctcaagtctatgtggcggagcccaaatggcacaataagaaatattctaaatggcactgtt
tttcgcgaacccatcttgtgtaaaaacataccacgtatattgtctggctggaagaaacct
atctgcataggaaggcatgcatttggtgaccagtatcgagcaactgatatgattattgat
ggtccaggaaagctcaagatggtatttgtgcctgagggagctgaggcggtggagtttgat
gtctatgattttaaaggacctggtgtggcattatcgatgtacaatgtggacgagtctatt
agggcttttgccgagtcatctatggctatggcactttccaaaaggtggcctctttatctc
agcaccaagaacacaatcctaaagaagtacgatggcagattcaaagacatcttccaggag
gtatatgaagagagctggaaggagaagtttgaggagaactcaatatggtatgagcaccgg
ttgattgatgacatggtagcctatgctgtgaaaagtgagggtgggtatgtttgggcgtgc
aaaaactatgatggagacgtccagagtgatttcctggcccaaggttttggttctctgggt
ctgatgacatcagtgctgctgtcttctgatgggaaaacattagaggctgaggctgctcat
gggactgtcactagacatttcaggctacatcagaaggggcaggagacgagcaccaacagt
attgcctcaatatttgcttggactcgtggactagaacacagagcaaagctggataaaaat
gataggctgctggatttcacacacaaacttgaatctgcttgtgttgagacggtggaatct
ggcaatatgacgaaggacctcgcacttcttattcatggccccaaggtatcaagggagttc
tacctgagcaccgaggagttcatcgatgctgttgctcagcaactgcgaggaaagattcag
acaccagctgcagtgtaa
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