KEGG   Panicum virgatum (switchgrass): 120682329
Entry
120682329         CDS       T07260                                 
Name
(RefSeq) protoporphyrinogen oxidase 2, chloroplastic/mitochondrial
  KO
K00231  protoporphyrinogen/coproporphyrinogen III oxidase [EC:1.3.3.4 1.3.3.15]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir00860  Porphyrin metabolism
pvir01100  Metabolic pathways
pvir01110  Biosynthesis of secondary metabolites
pvir01240  Biosynthesis of cofactors
Module
pvir_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00860 Porphyrin metabolism
    120682329
Enzymes [BR:pvir01000]
 1. Oxidoreductases
  1.3  Acting on the CH-CH group of donors
   1.3.3  With oxygen as acceptor
    1.3.3.4  protoporphyrinogen oxidase
     120682329
    1.3.3.15  coproporphyrinogen III oxidase (coproporphyrin-forming)
     120682329
SSDB
Motif
Pfam: Amino_oxidase NAD_binding_8 DAO FAD_binding_2 HI0933_like Pyr_redox_2 Thi4 FAD_oxidored Pyr_redox IlvN FAD_binding_3 GIDA NAD_binding_9 AlaDh_PNT_C FMO-like 3HCDH_N Pyr_redox_3 MCRA Lycopene_cycl DUF3713
Other DBs
NCBI-GeneID: 120682329
NCBI-ProteinID: XP_039820107
LinkDB
Position
7N:34993231..34999002
AA seq 539 aa
MLTSSASSHPHRPASPRASRPRLRPVLAMAGSDDPRAAPARSVAVVGAGVSGLAAAYRLR
KSGVNVTVFEAADRAGGKIRTNSEGGFLWDEGANTMTEGELEASKLIDDLGLHDRQQYPN
SQHKRYIVKDGAPALIPSDPISLMKSSVLSTKSKLALFLEPFLYKKSNTSNSGKVSDEHL
SESVRSFFERHFGREVVDYLIDPFVAGTSAGDPESLSIRHAFPALWNLERKYGSIIIGAI
LSKLTAKGGPVKTGSDSSGKRRNRRASFSFHVGMQSLINALHNEVGDGNVKLGTEVLSLA
CTFDGLPATGGWSISVDSKDGGSKDLAKNQTFDAVIMTAPLSNVQRMKFRKGGAPFVLDF
LPKVDYLPLSLMVTAFKKEDVKKPLEGFGVLIPYKEQQKYGLKTFGTLFSSMMFPDRAPD
DQYLYTTFVGGSHNRDLAGAPMSILKQLVTSDLKKLLGVEGQPTFVKHIYWRNAFPLYDC
DYNSVLEAIEKMEKNLPGFFYAGNNKDGLAVGNVIASGSRAADLAISYLESHTKYNNSH
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgctcacatcctccgcttcctcacatcctcatcgccccgcctccccgcgcgccagccgg
ccccgcctccgccccgtcctcgcgatggcgggctccgacgacccccgcgccgcgcccgcg
aggtcggtcgccgtcgtcggcgccggggtcagcgggctcgcggcggcgtacaggctgagg
aagagcggcgtgaacgtgactgtgttcgaagcggctgacagggcgggtgggaagatacgg
accaattccgagggcggcttcctctgggatgaaggggctaacactatgacagaaggtgaa
ttggaggccagcaagttgattgatgatctgggtctacatgacagacagcagtatcctaac
tcccaacataagcgttacattgtcaaagatggagcaccagcactgattccttcggatccc
atttcgttaatgaaaagcagtgttctttcgacgaaatcaaagcttgctttgtttctggag
ccatttctgtacaagaaaagtaacacaagcaactctggaaaagtgtctgatgagcattta
agtgagagtgtcaggagcttctttgaacgccactttggaagagaagttgttgactatctt
attgatccatttgtagctggaaccagtgcgggagatccggagtcattatctatacgccat
gcatttccagcattgtggaatttggaaagaaaatatggttctatcattattggtgccatc
ttgtctaagctaacagctaaaggtggcccagtaaagacaggaagtgattcatcagggaaa
agaaggaatagacgtgcatcattttcatttcatgttggaatgcagtcactaataaatgca
cttcacaatgaagttggagatggtaatgtgaagcttggtacagaagtattgtcattagca
tgtacctttgatgggctccctgcgactggtgggtggtcgatttctgttgattcgaaggat
ggtggtagcaaggatcttgctaaaaaccaaaccttcgatgctgttattatgacagctcca
ttgtctaatgtccagaggatgaagttcagaaaaggtggagctccctttgtgctagacttt
cttcctaaggtggattatctcccgctatctctcatggtgacagcttttaagaaggaagat
gtcaaaaaacctctggaaggatttggagtcttgataccctacaaggaacagcaaaaatat
ggtctgaaaacttttgggactctgttctcctcaatgatgttcccagatcgagctcctgat
gaccaatacttgtatacaacatttgttgggggaagtcacaatagagatcttgctggagct
ccaatgtctattttgaaacaacttgtgacttctgaccttaaaaagctcttgggtgtcgag
gggcaaccaacttttgtgaagcatatatactggaggaatgcttttcctttgtatgactgt
gattacaattctgtattggaagctatagagaagatggagaagaatcttccagggttcttc
tacgcaggaaataacaaggacgggctggctgttggtaatgttatagcttcaggaagcagg
gctgctgaccttgcaatctcgtatcttgaatctcacaccaagtacaataattcacactga

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