Panicum virgatum (switchgrass): 120682384
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Entry
120682384 CDS
T07260
Name
(RefSeq) malate synthase, glyoxysomal isoform X1
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00620
Pyruvate metabolism
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
120682384
00630 Glyoxylate and dicarboxylate metabolism
120682384
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
120682384
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GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
Motif
Other DBs
NCBI-GeneID:
120682384
NCBI-ProteinID:
XP_039820189
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Position
7N:complement(34843490..34845756)
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AA seq
565 aa
AA seq
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MAAASTTAAPATCYDTPEGVDVRGRYDPAFASVLTRGALAFVAGLQREFRGAVRHAMEQR
REAQRRYDAGEPPRFDPATRFVREGGWRCAPVPPAVADRTVEITGPAEPRKMVINALNSG
AKVFMADFEDALSPTWENLMNGQVNLRDAVAGTITFRDAARGREYRLNDQTAKLFVRPRG
WHLPEAHILIDGEPAIGCLVDFGLYFFHNHAAFRAGQGAGLGPFFYLPKMEHSREARIWN
GVFERAEQTAGIERASIRATVLVETLPAVFQMDEILYELRDHSVGLNCGRWDYIFSYVKT
FRAHPDRLLPDRALVGMGQHFMRSYSHLLIRTCHRRGVHAMGGMAAQIPIKDDAAANEAA
LELVRKDKLREVRAGHDGTWAAHPGLIPAIREVFEGHLGGRPNQIGDAPAGQEAATVTAE
DLIQPPRGARTVDGLRLNARVGVQYLAAWLAGSGSVPLYNLMEDAATAEISRVQNWQWLR
HGAALDAAGVEVRATPELLARVMEEEMARIQAEVGRERFRQGRYAEAGRIFSRQCTAPEL
DDFLTLDAYNLIVVHHPGGASPCKL
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcaagcaccacggctgcgccggcgacatgctacgacacgccggagggcgtg
gacgtccggggccggtacgacccggcgttcgcgtccgtcctgacccgcggcgcgctggcg
ttcgtggcgggcctgcagcgcgagttccgcggcgccgtccggcacgccatggagcagcgg
cgggaggcccagcggcggtacgacgccggcgagccgccgcggttcgacccggccacgaga
ttcgtccgggaggggggctggaggtgcgcgcccgtgccgccggccgtcgcggaccgcacc
gtggagatcacgggccccgccgagccccggaagatggtcatcaacgcgctcaactccggc
gccaaggtcttcatggctgacttcgaggacgcgctgtcgccgacgtgggagaacctgatg
aacgggcaggtgaacctgcgcgacgccgtggccggcaccatcaccttccgcgacgcggcg
cgcggccgggagtacaggctcaacgaccagaccgccaagctcttcgtccggccccgcggc
tggcacctcccggaggcgcacatcctcatcgacggcgagccggccatcggctgcctcgtc
gacttcgggctctacttcttccacaaccacgccgccttccgcgccggccagggcgccggg
ctcgggcccttcttctacctccccaagatggagcactccagggaggcgaggatatggaac
ggcgtgttcgagagggcggagcagacggccgggatcgagcgggcaagcatccgggcgacg
gtgctggtggagacgctgccggcggtgttccagatggacgagatcctgtacgagctgcgc
gaccactcggtggggctcaactgcggccgctgggactacatcttcagctacgtcaagacg
ttccgcgcccacccggaccgcctcctccccgaccgcgccctcgtcggcatgggccagcac
ttcatgcgctcctactcccacctcctcatccgcacctgccaccgccgcggcgtccacgcc
atgggcggcatggcggctcagatcccgatcaaggacgacgcggcggcgaacgaggcggcg
ctggagctggtgcgcaaggacaagctgcgggaggtgcgcgcagggcacgacggcacgtgg
gcggcgcacccggggctcatcccggcgatccgggaggtctttgagggccacctcggcggg
aggccgaaccagatcggcgacgccccagcggggcaggaggccgccacggtcacggcggag
gacctcatccagccgccgcggggcgcgcgcacggtggacggcctgcggctcaacgcccgc
gtgggcgtgcagtacctcgcggcgtggctggccggctccggctccgtgccgctctacaac
ctcatggaggacgcggccaccgcggagatcagtcgcgtccagaactggcagtggctgcgc
cacggcgcggcgctcgacgccgccggcgtcgaggtgcgcgccacgccggagctgctcgcg
cgcgtcatggaggaggagatggccaggatccaggccgaggtggggcgcgagaggttccgg
caggggaggtacgcggaggccgggaggatcttcagccggcagtgcacggcgccggagctc
gacgacttcctgacgctggacgcgtacaacctcatcgtggtgcaccatcccggaggtgcg
tcgccgtgcaagctttga
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