Panicum virgatum (switchgrass): 120682698
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Entry
120682698 CDS
T07260
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120682698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120682698
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
120682698
DNA repair and recombination proteins [BR:
pvir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120682698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
120682698
NCBI-ProteinID:
XP_039820631
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Position
7N:35875997..35879453
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AA seq
389 aa
AA seq
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MSGAGARGRLSPASGGAGDSEPRSVGSRTRSVSATRGRKPSPRPGRDVTAAAAAAEEKKP
AGVPTLLPSLSAPAGMRRQELLLRSGLSLDASCSSDASTDSFCSRASTGRIGRPSFGARK
KKTLSQTDYKAVSMLERDGGLASQTDAAGVKRRCAWVTANTDPCYAAFHDEEWGVPVHDD
KKLFELLVLSGALAELTWPAILNKRAMFREVFMDFDPVLVSKLSEKKIIAPGSPSSSLLS
EQKLRGVIENARQILKIVEEFGSFDKYCWSFVNHKPILSRFRYSRQVPVKTSKADAISKD
LVRRGFRSVGPTVVYTFMQVSGMTNDHLISCYRFTECAAASAGAAKPTDGSEASSSDSSH
ATTELKMDGTNGLAADIELSRTIDELSIS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtccggggctggcgcgagggggcggctgtcgccggcgtcaggcggcgctggggactcc
gagccgcggtccgtggggagcaggacgcgctcggtgtctgctactcgcgggcggaagccg
tcgccgaggcccgggagggatgtgactgcggcagcggcggcagcggaggagaagaagccg
gctggcgtgcccacattgctgccctcgctcagcgcgcccgcggggatgcggcggcaggag
ctgctgctgcgctcgggtctgtcccttgacgcgtcctgctcctcggacgcgtccacggac
tcgttctgcagccgggcgtccacggggcggattgggaggccgtcgtttggggcgaggaag
aagaagaccctctctcagaccgattacaaggctgtttccatgctggaaagggatggtgga
ttggcttcccagactgatgctgctggtgtgaagaggaggtgcgcctgggtgacagcaaat
actgatccctgttatgctgcgtttcatgatgaagagtggggagttccagtacatgatgac
aagaagttgtttgagttgctagtgctgtcaggtgcattagctgaacttacatggccagca
attctgaacaagagagccatgttcagggaagttttcatggattttgacccagtattggtc
tcaaaattaagtgagaagaaaattattgcacctggaagtcctagcagttccttgttgtct
gaacagaaactgcgtggtgttattgaaaatgcacgccaaatactcaagattgtagaggaa
tttggatcgtttgataaatactgttggagcttcgtgaaccacaaacctatattgagccgg
ttcaggtactctcgtcaagtgcccgtcaaaacatcaaaagcagatgccataagtaaagat
ctggttcggaggggtttccgcagcgttggcccaacagtcgtgtataccttcatgcaagtc
tcaggcatgaccaacgaccacctcatctcctgctaccgatttactgaatgtgcggcggcc
tctgctggtgctgctaaacctactgatggaagcgaagcgagttcaagtgacagcagccat
gccacgacggagctgaagatggacgggacaaatggactggctgctgatatcgaactctcc
aggactatagatgagctcagcatttcatag
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