Panicum virgatum (switchgrass): 120684338
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Entry
120684338 CDS
T07260
Name
(RefSeq) xylanase inhibitor protein 1-like
KO
K01183
chitinase [EC:
3.2.1.14
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
120684338
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.14 chitinase
120684338
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_18
Motif
Other DBs
NCBI-GeneID:
120684338
NCBI-ProteinID:
XP_039822139
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All DBs
Position
8N:complement(16404819..16406072)
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AA seq
314 aa
AA seq
DB search
MASRRRPSPPAAEALLPLAFLLLACLSSAAAAAKQTGQLTVFWGRNAGEGTLREACDTGL
YTTVVISFYSVFGHGRYWGDLSGHPLAGVGADIKHCQSRNVLVLLSIGGPGTGYSLPSSQ
SAADVADNLWNAHLGGRRRGVFRPFGDAAVDGIDFYIDVGGPGHYDELARRLDGYNRFYR
GRKGVRLTATPRCGFPDSRLDGALRTGLFERIHVRFYGNDTRCAYGAGAGTWGVAEAWKK
WAARYPRSEVYLGLAPAESGVPEGAQGTVAVYLKYLYYDLLPKVQEAPNYGGVMVWDRFS
DKKTRWSTVVKGWA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccgacgccggccaagccctccggcggcggaagctctcctcccgctcgcgttc
ctgctcctagcctgcctgtccagcgccgccgccgcggccaagcagaccggccagctcacc
gtcttctggggccggaacgcgggcgagggcaccctgcgcgaggcctgcgacacggggctc
tacaccaccgtcgtcatctccttctacagcgtcttcggccacggccgctactggggcgac
ctgtcgggccacccgctcgccggcgtcggcgccgacatcaagcactgccagtcccggaac
gtcctcgtgctcctctccatcggcgggcccgggaccggctactccctcccgtcgtcccag
tccgccgctgacgtcgccgacaacctctggaacgcgcaccttggcgggcgccgccgcggc
gtgttccgccccttcggcgacgccgccgtcgacggcatcgacttctacatcgacgtcggc
gggccgggccactacgacgagctggcgcgccgcctcgacgggtacaaccggttctaccgc
ggccggaaaggggtgcggctgacggcgacgccgcggtgcgggttcccggactcccggctc
gacggcgcgctgcggacggggctgttcgagcgcatccacgtccggttctacggcaacgac
acgcggtgcgcctacggggccggcgccgggacctggggcgtcgcggaggcgtggaagaag
tgggcggcgaggtacccgcggagcgaggtgtacctggggctcgccccggcggagagcggc
gtgccggagggggcgcagggcaccgtcgccgtctacctcaagtacctctactacgacctc
ctgcccaaggtgcaggaggcgcccaactacggcggggtcatggtctgggacaggttctcc
gacaagaagacacggtggagcaccgtcgtcaagggatgggcctga
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