Panicum virgatum (switchgrass): 120686375
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Entry
120686375 CDS
T07260
Name
(RefSeq) putative pentatricopeptide repeat-containing protein At4g17915 isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
PPR_2
PPR_1
PPR
PPR_3
PPR_long
MRP-S27
Toxin_YhaV
Motif
Other DBs
NCBI-GeneID:
120686375
NCBI-ProteinID:
XP_039824508
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Position
8N:complement(5897884..5900574)
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AA seq
462 aa
AA seq
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MARSRALLDLSTRLMNVCLAALCRGGSLDRAEAVLVDAIRLGLPPDVVTYNTLLAAHCRA
AGLDAGLAVVHRMREAGVSPDAVTYNSLIAGAARRGLTMCALDLFDEMLRSGVAPDSWSY
NALMHCLFRSGHPEDAYRVFADMVEKGVAPSATTYNTMLDGLFRAGHATNAYRMFRYLQR
VGLPIGIVTYNTMINGLCRSGKVGYARMVLKELGRTEHAPNAITYTTIMKCCFRYARFDQ
GLETFLSLLEGGYISDAFPYTTVISALVKKGRMQEANAYCELMIQSGSTLDNACYNTLIH
LRCQEGKLDDAFELLKIMEEGGLESDEYTFSILVNGLCKMGQIKAAEKQIWSMEMMGMES
NVVAYNCLIDALCKSHEVDAAIKVLHSMKLKDDFTYTSLVHGLCKVGRYHMASKFLRICL
REGNNVLASAKRAVISGLRSAGFKNDLRKVRSALYMARLLRS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcccggtcccgagcgctgctggacctgtccactcggctgatgaacgtctgcctcgcc
gcgctctgccgcgggggcagcctcgaccgcgcggaggccgtcctcgtcgacgccatccgc
ctcggcctgccccccgacgtcgtcacctacaacaccctcctcgccgcgcactgccgggcc
gcggggctcgacgccgggctcgccgtcgtgcaccggatgcgggaggccggggtgagcccc
gacgccgtcacctacaactccctcatcgcgggcgcggcacgccgcgggctcacgatgtgc
gccctcgacctgttcgacgaaatgctccgctcgggcgtcgcccccgactcgtggagctac
aacgcgctcatgcactgcctgttccggtctggacacccggaggacgcgtaccgggtgttt
gctgatatggtggagaagggcgtcgcgccgtccgccacgacgtacaacacgatgctcgac
gggctgttcagggctggccacgcgacgaacgcctacaggatgttcaggtacctgcagagg
gtgggtctccccattggcattgtgacttacaacacaatgatcaacgggctgtgcaggtca
ggcaaggtgggctatgcccgtatggtccttaaggaactggggaggaccgaacatgcccct
aatgccatcacatacacgacgattatgaagtgctgctttagatacgccaggtttgatcag
ggtttggagacctttttgtccctgcttgaaggagggtacatttcagatgctttcccgtac
acgacagtgatcagcgcgcttgtaaagaagggccggatgcaggaagccaatgcctattgc
gagctcatgatacaaagtggttccactcttgacaatgcatgctacaacacgcttattcac
ctgcgatgccaagaagggaagctggacgacgcgtttgagctgctgaaaattatggaagaa
ggtggtctggagagcgatgagtacacattctcaattttggtcaatggtctgtgcaagatg
gggcaaatcaaggctgcagagaagcagatatggtccatggagatgatgggcatggaatca
aatgtggtggcatacaattgcttgattgatgcactatgcaaatctcatgaggtggatgca
gccatcaaagtactgcacagcatgaagctaaaggatgattttacttacacatcactagtc
catggtctctgtaaggtgggtaggtaccatatggcatcaaaattcttgcggatctgcttg
cgtgaagggaacaatgttcttgcatctgcaaagcgcgctgtcatttctgggcttcgtagt
gcagggtttaaaaatgatttgaggaaagtccgatcagcattatatatggctaggctgttg
cggtcttag
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