Panicum virgatum (switchgrass): 120690020
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Entry
120690020 CDS
T07260
Name
(RefSeq) isocitrate lyase-like
KO
K01637
isocitrate lyase [EC:
4.1.3.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00630
Glyoxylate and dicarboxylate metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
Module
pvir_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
120690020
Enzymes [BR:
pvir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.1 isocitrate lyase
120690020
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Motif
Pfam:
ICL
PEP_mutase
Motif
Other DBs
NCBI-GeneID:
120690020
NCBI-ProteinID:
XP_039828464
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Position
2K:complement(58804000..58806306)
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AA seq
575 aa
AA seq
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MATPLSVPSLIMEEEGRFEAEVAEVESWWGTERFRLTKRPYGARDVVLLRGTLRQSYASG
EMARKLWRTLRAHQAAGTASRTFGALDPVQVTMMAKHLDTIYVSGWQCSSTHTSTNEPGP
DLADYPYDTVPNKVEHLFFAQLYHDRKQREARMSLPRADRARAPYVDYLKPIIADGDTGF
GGATATVKLCKLFVERGAAGVHLEDQSSVTKKCGHMAGKVLVAVSEHVNRLVAARLQFDV
MGVETVLVARTDAVAATLIQTNVDARDHQFILGATNPRLRGRSLAAVLSDAMAAGKTGRE
LQAIEDDWLAAAQLKTFSDCVRDAIAGLSVTDQEKQRRLQEWDSTTGGYDRCVSNEEARD
IAARLGVASVFWDWDLPRTREGFYRFRGSVAAAVVRGRAFAPHADVLWMETSSPNVGECT
AFAEGVRAAHPEAMLAYNLSPSFNWDASGMTDADMAAFIPRVARLGYVWQFITLAGFHAD
ALVTDTFARDFARRGMLAYVEMIQREERINGVETLEHQKWSGANFYDRVLKTVQGGISST
AAMGKGVTEEQFKDSYPATGTGGGTSLQVVAKSRI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccgctctccgttccttccttgatcatggaggaggaagggcggttcgaggcg
gaggtggcggaggtggagtcgtggtggggcacggagcggttccgcctcaccaagcgcccc
tacggcgcccgcgacgtggtcctcctccgcggcacgctccggcagagctacgcctccggg
gagatggcccggaagctgtggcgcacgctccgggcgcaccaggccgccggcaccgcctcc
cgcaccttcggcgcgctcgaccccgtccaggtcaccatgatggccaagcacctcgacacc
atctacgtctccggctggcagtgctcctccacccacacctccaccaacgagccgggcccg
gacctcgccgactacccctacgacaccgtgcccaacaaggtggagcacctcttcttcgcc
cagctctaccacgaccgcaagcagcgcgaggcgcgcatgtcgctgccccgcgccgaccgc
gcccgcgcgccctacgtcgactacctcaagcccatcatcgccgacggcgacaccggcttc
ggcggcgccaccgccaccgtcaagctctgcaagctcttcgtcgagcgcggggccgccggg
gtccacctcgaggaccagtcttcggtgaccaagaagtgcggccacatggccggcaaggtg
ctcgtcgccgtctccgagcacgtcaaccgcctcgtcgccgcgcgcctccagttcgacgtc
atgggtgtcgagaccgtcctcgtcgcgcgcaccgacgccgttgccgccacgctcatccag
accaacgtcgacgcgcgcgaccaccagttcatcctcggcgccaccaacccgcgcctccgg
ggccgcagcctcgccgccgtgctctccgacgccatggcggccggcaagaccggccgggag
ctccaggccatcgaggacgactggctcgccgccgcgcagctcaagaccttctccgactgc
gtccgggacgccatcgcggggctcagcgtcaccgaccaggagaagcagcgcaggctccag
gagtgggacagcaccaccggcggctacgacaggtgcgtgtccaacgaggaggcgcgcgac
atcgcggcgcgcctcggcgtcgcgtccgtgttctgggactgggacctgccgcggaccagg
gaggggttctaccgcttccggggctccgtggcggcggccgtggtgcgcggccgcgccttc
gcgccgcacgccgacgtgctctggatggagacgtcgagccccaacgtgggcgagtgcacg
gccttcgccgagggcgtcagggcggcgcacccggaggcgatgctggcctacaacctctcg
ccgtccttcaactgggacgcctccgggatgacggacgccgacatggcggccttcatcccg
cgcgtcgcgcgcctcggctacgtctggcagttcatcacgctcgcggggttccacgccgac
gcgctcgtcaccgacaccttcgcccgggacttcgcgcggcgcggcatgctggcgtacgtg
gagatgatccagagggaggagaggatcaacggggtggagacgctggagcaccagaagtgg
tcgggcgccaacttctacgacagggtgctcaagaccgtgcagggcggcatctcctccact
gctgccatgggcaaaggagtaactgaagagcagttcaaggactcgtatcctgcaactgga
actggtggtggtaccagccttcaagttgtcgccaaatccaggatttga
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