Panicum virgatum (switchgrass): 120690855
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Entry
120690855 CDS
T07260
Name
(RefSeq) hydroxyproline O-galactosyltransferase GALT6-like
KO
K20843
hydroxyproline O-galactosyltransferase 2/3/4/5/6 [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120690855
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Gal type
120690855
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Gene cluster
GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
120690855
NCBI-ProteinID:
XP_039829641
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Position
9N:3772994..3777528
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AA seq
656 aa
AA seq
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MRRPPGAGAPCRRRAIQGFVALFLAYALFVLLLESPLVSTSLPGAGASAAAASRKLHLDG
AWEGGRAAPARPSKHPHRETLSADGGRGRARRLSWFVSGLELRHLNSTRSGSLRKVAAEA
AESGARVFADLHTLATNLTFSQDSPDEEERSMCPHSIALSGDEFRERGRTVELPCGLTLG
SYITVAATPHEAHPERDPKITLLKEGEEPIMVSQFMMELQGLKTVDGEDPPRILHFNPRL
RGDWSGKPVIEQNTCYRMQWGTPLRCEGWRSRADEETVDGLVKCEKWIRDDEGRSEESKT
SWWLNRLIGRTKTVSIDWPYPFVEDHLFVLTLTAGLEGYHVNVDGRHVTSFPYRTGFVLE
DATGLSLNGDLDVQSVFAGSLPTTHPSFSPQKHLEMLPSWQAPPLPDEPVEIFIGILSAG
NHFAERMAVRKTWMSASQKSSNVVARFFVALHGRNEINVELKKEAEFFGDIVIMPFMDSY
DLVVLKTIAICEYGVHVVSARYIMKCDDDTFVRLESVMAEVKKIRNGESLYIGNMNYHHK
PLRDGKWAVTYEEWPEEDYPIYANGPGYVISSDIADAILSEFLNHKLRLFKMEDVSMGMW
VERFNSTRPVKYVHSIKFCQFGCIDDYYTAHYQSPRQMLCLWDKLQAGKAQCCNMR
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgcggaggccgcctggggccggcgcgccgtgccgccgccgcgcgatccaggggttcgtg
gcgctcttcctcgcctacgcgctcttcgtgctgctcctcgagtcgccgctcgtgtccacg
tcgctgcccggggcgggggcctccgccgccgcggcgtcgcggaagctccacctcgacggc
gcgtgggagggagggcgcgccgcgccggcgcggccctcgaagcacccccaccgggagacc
ctctcggcggacgggggccgcgggcgggcgcgccggttgtcgtggttcgtctccggcctc
gagctccgccacctcaactccacccgctccggctcgctgcgcaaggtcgccgccgaggcg
gcggagtcaggggcccgcgtgttcgccgaccttcatactctcgcgacgaacctgacgttc
tcgcaggattcgccagacgaggaggagaggagcatgtgtccgcactcgatcgccctcagc
ggggacgagttccgggagagggggcggacggtggagctgccgtgcgggctgacgctgggt
tcgtatatcacggtggccgcgacgccgcacgaggcgcaccctgagcgggatcctaagatc
acgctgctcaaggagggggaagagccgatcatggtgtcgcagttcatgatggagctgcag
gggctcaagacggtggacggcgaggatcctcccagaattctccacttcaacccccgcctc
cgcggcgactggagtggcaagccggtgatcgagcaaaacacctgctaccgcatgcagtgg
ggcactccccttcgctgtgagggctggaggtcccgtgctgacgaggagaccgttgatggg
ttggtgaagtgtgagaagtggattcgggatgatgaaggccggtcggaggagtcaaaaacg
tcatggtggttgaaccggctcattgggcgcacaaagactgtctcaattgattggccatac
ccatttgtggaggaccacctgtttgttcttacactcaccgctggattggaaggttaccat
gtgaatgttgatggacgtcatgtgacatcatttccataccgcactgggtttgtgcttgag
gatgctactggcttatcattgaatggggaccttgatgtgcaatcagtgtttgcggggtct
ttgcccactacacatcctagcttttctccacagaagcacctagagatgttacccagttgg
caggcccctcccctcccagacgaaccggttgaaattttcattggtatcctgtcagcgggc
aaccattttgctgagcgtatggctgtgagaaagacatggatgtctgcttcccagaagtca
tcgaatgttgtggcccgtttttttgttgccctgcatggaagaaatgaaattaatgtggag
ctgaaaaaggaggctgagttttttggggacattgttattatgccattcatggacagctac
gatttggtggttctgaagacgattgccatatgcgagtatggggtccatgttgtatctgct
agatacataatgaagtgcgatgatgatacttttgttagacttgaatcagtaatggctgaa
gtgaagaaaatccggaacggtgaaagtctctatatagggaacatgaattatcaccacaag
ccattgcgcgatgggaaatgggctgttacatatgaggaatggccagaagaggattatcca
atctatgcaaatggtcctggatatgttatatcttctgatattgcagatgccattctgtca
gaatttttaaaccataaattaaggcttttcaaaatggaggatgtgagcatgggcatgtgg
gttgagcggttcaacagcactagacctgttaaatacgtccacagcatcaaattttgtcaa
tttggatgcatagatgattattacactgcacactaccaatcaccgaggcagatgttatgt
ttgtgggacaagctgcaggctggtaaagcacaatgttgcaatatgagatag
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