Panicum virgatum (switchgrass): 120691697
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Entry
120691697 CDS
T07260
Name
(RefSeq) importin-4-like isoform X1
KO
K20221
importin-4
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120691697
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120691697
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
120691697
Pre-60S particles
120691697
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_EZ
HEAT_2
Vac14_Fab1_bd
IBN_N
MMS19_C
Cnd1
IFRD
DUF3385
Maestro_HEAT
Htt_N-HEAT_1
ParcG
CLASP_N
Tti2
Importin_rep_6
Motif
Other DBs
NCBI-GeneID:
120691697
NCBI-ProteinID:
XP_039830781
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All DBs
Position
9N:70508774..70522516
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AA seq
1047 aa
AA seq
DB search
MAQSLELLLIQFLMPDNDARRQAEEQIRRLARDPQVVPALVHHLRTAKTPNVRQLAAVLL
RKKITSHWPKLPLDSKASLKQALIDSITLDHSHPVRRASANVVSIIAKYAIPAGEWPELL
PFLFQCSQSPQEDHREVALILFSSLTETIGATFQSHLNNLQPILLKCLQDGTSSRVRIAA
LKAVGSFIEYVNDGGDIVKMFRDFVPSILNVSRQCLANGEEDVASIAFEIFDELIESPVP
LLGDSVRIIVQFSLEVSANQDLEINIRQQAIQIISWLAKFKASFLKKHKLVVPILQVMCP
LLTETANEDEDSDLAADRSAAEVIDTMAINLPRHVLAPVLEFASVSFHHINPKYREAAVT
SLGVIAEGCCEHLKDKLEDCLKIVLEALKDQEQMVRGAASFALGQFAEHLQPEILSHYAN
VLPCILNALEDPSDEVKEKSYYALAAFCEDMGEDILPYIDPLICKLVMSLQSSPRNLQET
CMSAIGSVAAAAEQAFTPYAEKVLEMMKGFMVLTSDEDLCARARATEVVGIVAMAVGRAR
VEAILPPFIEAAIAGFGLDYSELREYTHGFFSNVAEILGDSFTQYLPHVVPLVFSSCNLD
DGSAVDIDDANDENGFGGVSSDDDDVNDEPRVRNICVRTGVLDEKAAATQAIGFFALHTK
SAYAPYLEESLKILIRHSGYFHEDLRLQAVISLKHILTAVRAIPATHADVQEKQKDVLDS
VLNICIKTMTKDDDKEVVAQACMSVADIVKDCGFAAIEPYILRLAEATLVLLRQESSCQQ
VESDGEDDGDIDHDEILMDAVSDLLPAFAKVMGSYFDPIFAKLFDPLMKFAKSPHPPQDK
TMVVATLAEVAQEMGAPISAYVDKIMPLVLKELASSDATNRRNAAFCVGEICKNGGAATL
KYYGDILRSLHNLFSNSESDDAVRDNAAGAIARMIMVQPQSIPLNQVLPVFIKALPLKED
HEESMPVYSCICSLLLSSHPQILPLVPDVIHVFAQVVVSPDESDEVKTNIGKAVSHLISV
YGQQMQPILSALPPAHANALAAFASRR
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtcgctggagctgctgctgatccagttcctgatgccggacaacgacgcgcgt
cggcaggcggaggagcagatccggcggctggcgcgcgacccgcaggtggtcccggcgctc
gtccaccacctccgcacggccaagacgcccaacgtccgccagctcgccgccgtgctactc
cgcaagaagatcacctcccactggcccaagcttcccctggactccaaggcgtccctcaag
caagccctcatcgactcaatcacgctcgaccacagtcatcctgtaaggcgagctagtgca
aatgttgtgagcattatagctaagtatgctatccctgcaggagagtggccagagctgtta
cctttccttttccaatgcagccaaagtcctcaggaagatcatagagaagtggctttgatt
cttttcagctcccttactgaaactatcggggctacgtttcagtctcatctgaacaatttg
caacctattttgctgaaatgtctgcaagacgggactagttctcgagtcagaattgcggcc
ttaaaggctgttggatctttcatagaatatgtcaatgatggaggtgacattgtcaaaatg
tttcgggactttgttcccagtatcttgaatgtatcaaggcaatgtcttgctaatggcgag
gaagatgttgcttcaattgcatttgaaatttttgacgaactaattgaatctccagtgcca
cttcttggtgactctgtaaggataattgtgcaattctcgctggaagtttctgcaaaccag
gatctggaaataaatataaggcagcaggctatccagataatttcatggcttgcaaagttt
aaagcatctttcttgaaaaagcacaaactggttgtacctatcctgcaagttatgtgccct
ttgcttacggaaacagctaatgaagatgaagactctgatctagcagcagatcgctctgct
gctgaagtcattgatacgatggctatcaacttaccaagacacgttcttgcaccagttctt
gagttcgcttctgtgagctttcatcacattaatcctaagtatcgtgaggctgctgtgaca
tcactgggtgttattgcagagggttgttgcgaacatttgaaagataagttggaagattgt
ctgaaaattgttttggaagcattaaaggatcaagagcaaatggttagaggcgctgcgtct
tttgctcttggtcagtttgctgaacacctgcaaccagaaattttgtctcattatgcgaat
gtacttccatgcatcctaaatgctcttgaagacccatcagatgaagttaaggagaaatca
tattatgcccttgcagcattctgtgaggacatgggtgaagatatcctgccatatatagac
cccttgatatgcaaattggttatgtctttgcagagcagtccgcggaacttgcaagagaca
tgcatgtctgcaattggctccgtggccgctgctgcagagcaggcttttaccccatacgca
gaaaaggtccttgaaatgatgaaaggtttcatggtgctcactagtgacgaagatttgtgt
gcaagagctagggctaccgaggttgttgggatagtagccatggcagttggcagagcaagg
gttgaagcgatactgcccccctttatcgaggctgctattgccggttttggattggattac
agtgaacttagagaatatactcatggtttttttagcaatgttgctgagatcttgggtgat
agttttacacagtatcttcctcatgttgtacctctcgtattttcttcctgcaacttggat
gatggttctgctgtggatattgacgatgctaatgatgaaaatggatttggtggtgtttcc
tctgatgatgatgatgttaatgatgaaccaagagttagaaatatctgtgtgcggactggg
gtattagacgagaaagctgctgcaacacaggctattggtttttttgcactacacacgaag
agtgcctatgctccgtatctggaggagtcgctgaagattttaatcaggcacagtgggtat
tttcacgaagatctgaggctccaggcagtcatttctttaaagcatatcctaactgcagtt
agggcaatacctgctacacatgctgatgtacaagagaaacagaaggatgtccttgattcg
gttctgaacatctgtattaagaccatgacaaaggatgatgacaaagaggtagttgcacaa
gcttgcatgagtgtagcagacattgtgaaggactgtggttttgctgcaattgaaccttac
atactaaggcttgctgaggcgacactggttcttttgcgtcaagaatcaagttgtcagcaa
gtagagtcagatggtgaggatgatggcgacattgatcatgatgaaatcctcatggatgct
gtttcagatctattgccagcttttgcaaaagtgatgggttcttattttgatcctatcttt
gcaaaattgtttgatccattgatgaaatttgctaaatctccccatcctccccaagataag
actatggttgttgcaaccttagctgaggtcgctcaggaaatgggtgctccaatttctgct
tatgttgataagataatgcctttggtgttgaaagagcttgcatcatctgatgctactaat
aggagaaatgctgctttctgtgttggtgagatttgcaagaatgggggtgctgcgacacta
aagtactatggggatatacttcgttctctgcataatctgtttagtaactccgaatcagat
gatgcagtgagagataatgctgctggtgctattgctaggatgataatggtgcagcctcag
tcaattcctctcaaccaggttcttccggtatttattaaagcattgccactaaaagaagat
catgaagaatcaatgcctgtctatagttgcatctgcagtttattactatcatcgcatccc
cagatccttcctcttgtgcctgatgtgatacatgtatttgcccaagtggtggtatcccca
gacgagagcgatgaagtcaaaacaaatattggcaaggctgtatctcacttgatatctgtc
tatggccagcaaatgcagcctatactgagtgcactgccaccagctcatgcaaacgcattg
gcagcatttgccagtagaagatga
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