Panicum virgatum (switchgrass): 120695663
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Entry
120695663 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120695663
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120695663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120695663
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
120695663
DNA repair and recombination proteins [BR:
pvir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120695663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
120695663
NCBI-ProteinID:
XP_039834809
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All DBs
Position
2K:complement(45139991..45144535)
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AA seq
413 aa
AA seq
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MSAVVSSPRAAGAARRLSPSPKPAGARDKGDKEEPPSLEGAADKARRRLLPSAPARGTAA
SMLLRRAGAGARGSSYVHPSSSLSVSCASEASTESFCSRASTGRIGRRPAGPPVGAPRRR
AAGSAGPPSARPASSRKVAGAVPGGAAVTAAPAVPPMLGPVNGEHTATSAGPPRCPWVTP
NTDPCYAAFHDHEWGVPVHDDKKLFEMLTLSGALAEMAWPAILSKRDTFREVFMDFDPVL
VAKLSEKKFLAPSSPASSLLSEHRLRIIIENARELLKVIEEFGSFDSYCWSFLINKPMVG
RYRHTREVPLRTAKADAISQDLMRRGFLGVGPTVVYAFMQAVGMANDHLVTCYRFEECCD
IKDDDVAGAATDDGYGDSCKPAAVSEQEVSMLCGLVQCVALEPSRAATVISIS
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcggtggtgtcgtctccccgcgcggccggcgccgcacggcggctgtctccgtct
cccaagccggccggcgccagggacaagggcgacaaggaggagcctccatcgctcgagggc
gccgccgacaaggccaggaggaggctgctgccgtcggccccggccaggggcaccgcggcg
tccatgctgctgcgccgcgccggcgccggcgcgcgggggagcagctacgtgcacccgtcc
tcgtcgctcagcgtctcgtgcgcgtcggaggcgtccaccgagtccttctgcagccgcgcg
tcgacgggccgcatcggccgccgccccgcgggcccgcccgtgggagccccgcgccggcgg
gcggcgggctcggccgggcctccttcggcgcggccggcctcgtccaggaaggttgccggc
gccgtgccaggcggtgcggcggtcactgctgctccggcggtgccgccgatgctgggcccc
gtgaatggagagcacaccgcgacgtcggcggggccgccgaggtgcccctgggttacccct
aacactgatccctgctacgctgccttccatgaccacgagtggggagtgccagtgcatgac
gacaagaaattgtttgaaatgctaacactgtctggtgcactggctgagatggcatggcct
gcgattctcagcaagagggacaccttcagagaagtgttcatggacttcgaccccgtgttg
gtggccaagctgagcgagaagaaattcttggcgccaagcagccctgctagctccctgttg
tccgaacacaggctgcgcataatcatcgaaaacgcacgtgagttgctgaaggtcatagag
gagttcgggtcgttcgacagctactgctggagcttcctgatcaacaagccgatggttggc
agataccggcacacgcgggaggtgccgctgcggacggcgaaggccgacgccatcagccag
gacctgatgcgtcggggcttcctcggcgtcggcccgacggtggtctacgccttcatgcag
gccgtcggcatggccaacgaccacctcgtcacctgctaccgcttcgaggagtgctgcgac
atcaaagacgacgacgtcgccggcgccgcaactgatgacggctacggtgacagttgcaag
ccggcagcggtgagcgagcaggaggtgagcatgctttgtgggctggtgcagtgcgtcgcc
ctggagccgtcgagagccgccacggtgatcagcatctcatag
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