Panicum virgatum (switchgrass): 120696206
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Entry
120696206 CDS
T07260
Name
(RefSeq) beta-hexosaminidase 2-like
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00511
Other glycan degradation
pvir00513
Various types of N-glycan biosynthesis
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir00531
Glycosaminoglycan degradation
pvir00600
Sphingolipid metabolism
pvir00603
Glycosphingolipid biosynthesis - globo and isoglobo series
pvir00604
Glycosphingolipid biosynthesis - ganglio series
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
120696206
09103 Lipid metabolism
00600 Sphingolipid metabolism
120696206
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
120696206
00531 Glycosaminoglycan degradation
120696206
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
120696206
00604 Glycosphingolipid biosynthesis - ganglio series
120696206
00511 Other glycan degradation
120696206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120696206
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
120696206
Chaperones and folding catalysts [BR:
pvir03110
]
Intramolecular chaperones
Others
120696206
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
Motif
Other DBs
NCBI-GeneID:
120696206
NCBI-ProteinID:
XP_039835275
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All DBs
Position
2K:complement(61796037..61797933)
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AA seq
583 aa
AA seq
DB search
MATLLLRLLFLLGWPAAMLLTRAAADASFPINVWPKPVSMSWAEPYTAVPVSPSFHIVAP
SGNPYLASAAERYAMLLVTERYRPVVGPAVTINAGTALAKLTVAVSDLAAPLQHGVDESY
TLEVLPAGGAATLTAVTAWGAMRGLETLSQLAWRAGRGRGRELLLVAAGVRVEDRPLYPH
RGLMLDTGRTYFPVSDILRTIDAMAANKINVFHWHITDSQSFPIELPSEPQLAEKGAYGE
DMRYTVKDVKRIVEFAMSRGVRVVPEIDSPGHTASWAGAYPEAVACAGQFWLPGGDWNNR
LAAEPGAGQLNPLAPKTYEVITNVVNDLTSLFPDGFYHAGADEVTPGCWHADPAIQADLD
RGATLSQLLERYVSAVHPLVVSRNRTAVYWEDVLLDAAVNVSSSAIPPATTILQTWNNGP
NNTKLIVQAGYRAIVSSASFYYLDCGHGDFVGNNSIYDDPNSDFNSSGGSWCGPYKTWQR
VYDYDIAYGLTADEARLVIGGEVAMWTEQVDTTVLDGRVWPRASAMAEALWSGNRDAAGR
KRYAEATDRLTDWRNRMVGRGVRAEPIQPLWCRTRPGMCNAVQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcttctccttcggctgctgttcttgctcggctggccggcggcgatgctcctg
acgcgcgcggccgcggacgcctcgttcccgatcaatgtctggcccaagccggtgtccatg
tcgtgggcggagccgtacacggccgtgccggtgtcgccgtcgttccacatcgtcgcgccg
tccgggaacccgtacctcgcctcggccgcggagcgctacgccatgctgctggtcacggag
cgctaccggcccgtcgtcgggccggcggtcaccatcaacgccgggacggcgctggcgaag
ctgaccgtggccgtgtccgacctcgccgccccgctgcagcacggcgtggacgagtcctac
acgctggaggtcctccccgcgggcggcgcggccacgttgaccgcggtcaccgcgtggggc
gccatgcgcgggctcgagacgctctcgcagctggcgtggcgggccggccgcggccgtggc
cgggaactgctgctggtggccgccggcgtgcgcgtcgaggaccggcccctgtacccgcac
cgcgggctgatgctcgacaccgggaggacctacttccccgtgtccgacatcctgcgcacc
atcgacgccatggcggccaacaagattaacgtgttccactggcacatcacggactcgcag
tcgttccccatcgagctgccctccgagccgcagctcgccgagaagggcgcctacggcgag
gatatgaggtacaccgtcaaggacgtcaagcgcatcgtcgagttcgccatgagccgcggc
gtccgtgtcgtgccggagatagactcgccggggcacacggcgtcgtgggccggcgcgtac
ccggaggccgtggcctgcgcgggccagttctggctgcccggcggcgactggaacaaccgt
ctcgcggcggagccgggcgccggccagctcaacccgctggcgcccaagacgtacgaggtc
atcaccaacgtcgtcaacgacctgacctccctcttccccgacggcttctaccacgccggc
gccgacgaggtcaccccgggctgctggcacgcggaccccgcgatccaggccgacctggac
cgcggcgccacgctgagccagctcctggagcgctacgtcagcgcggtgcacccgctggtg
gtgtccaggaaccgcacggccgtgtactgggaggacgtgctgctggacgcggccgtgaac
gtgagctcgtcggcgatcccgccggcgacgaccatcctgcagacgtggaacaacgggccc
aacaacacgaagctcatcgtgcaggccgggtaccgcgccatcgtctcctcggcgtccttc
tactacctcgactgcggccacggcgacttcgtcggcaacaacagcatctacgacgacccc
aacagcgatttcaacagcagcggcgggtcctggtgcgggccctacaagacgtggcagcgg
gtgtacgactacgacatcgcgtacgggctcaccgccgacgaggcccggctggtcatcggc
ggcgaggtggccatgtggacggagcaggtggacacgacggtgctggacggccgggtctgg
ccgagggcctcggccatggcggaggcgctctggtccggcaaccgcgacgcggccggcagg
aagaggtacgccgaggcgaccgaccggctcaccgactggcgcaaccgcatggtggggaga
ggggtccgggccgagcccatccagccgctctggtgccggacacgccccgggatgtgcaac
gccgtccagtaa
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