Panicum virgatum (switchgrass): 120696642
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Entry
120696642 CDS
T07260
Name
(RefSeq) proteasome adapter and scaffold protein ECM29-like isoform X1
KO
K11886
proteasome component ECM29
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120696642
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
Other PIPs
120696642
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ecm29
HEAT_EZ
CEP104-like_TOG
Motif
Other DBs
NCBI-GeneID:
120696642
NCBI-ProteinID:
XP_039835541
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Position
3K:1486016..1506094
Genome browser
AA seq
1817 aa
AA seq
DB search
MAEQPAPAAAPAPAAAEQTDAERLDALDRMLTRLALADDARLAPVLARVLPYAITSLASP
APAVRKLVMEILSHINKRVKHRPEIPLPMLDLWKIYTESASSTIVRNFCVVYIEMAFERL
PTEEKGNIAPDFLANISNVPAHLQGIILRLVTKAIGECNIHKVDATIASKYQAITESNDG
LVFADFCFHTLLYQTPPQGIGCPSGLSVAQSDRVTGKLPLKGDILASRKLGILNVIEAMN
FAPEIVYPLYLSAASDSQESVSKKGDELLKRKASTVNLEDPNLIKKLFTLFNGTVGAENI
AAELKVSPAHASLRMRLMSVFCRSIAAANAFPHTLQCIFGCIYGSGTTSRLKQLGMEFTV
WVFKHAVTDQLKLIGPVILSGILRSLDGSSSTETDSTGRDTNIFAYQAIGLLASRMPNLF
SDKTDMAIRLFTALRLEDQSLRLTIQEAATSLATAYKGASMIVLKNLEVLLLENCEAEQS
EVRFSAIRWATTLYDTQHCPSRYICMTGASDVKLDIREMALAGLNLLNDGRQSSVGSADF
KYPDVTEMLNYICHQRPQLLCSDDQTNGKLLFPSKTFLSMIKFLMKCFESSDSPNLAQED
PSHSPVAKMCIILENAMSYEGSSELHALALKSLVDLSSRQPKMVLLRYADRIQWLRGLLG
HVDSDAREAASRLLGIASSALSSSAALTLLSEFTSTLDQNRPTRFENYHGLLCAIGYLTA
GCLKQSYIPEEMVKNVVDILVKVIDSEGSALASVAMVSLGHIGLRCALPSINQNSSTGAL
LTILHEKLTKLLSENDTKAIQKILVSLGHICWNEMSFPHLNNALDLIFSLSRSKVEDVLF
AAGEALSFIWGEVPVTADVILETNFGSLSQATNYLTSDTPLVSSNSYERSVCEEAHGMAR
EKIIKKLFETLIFSSRKEERCAGTVWLVSLTMYCGRHPKILELLPQIQEALSHLLGDPNE
LTQDLASQGMSIVYELGDASMKEQLVHALVNTLTGAAKKKKAIKLMEDSEVFQEGTIGNN
PTGGKLTTYKELCSLANEMGQPDLIYKFMDLANYQAALNSKRGAAFGFSKIAKQAGEALQ
PYLNALIPRLVRYQYDPDKNIQDSMGHIWKLIVSDPKKAIDEHYDVIVEDLLVQSGSRLW
RSREASCLALADIIQGRRYSQVSKHLRKIWTTAFRAMDDIKETVRNAGDSLCRAVSSLTI
RLCDVSLTSTSDANETMNIVLPYLLSEGILSKVSSVQKASISLVMKLAKGAGPALRPHLA
ELVSCMLECLSSLEDQRLNYVEMHAGNAGIKTDKLESLRIAVAKDSPMWETLDICIKVVD
KNSLDILVPRLAQMVRSAVGLNTRVGVASFITLLVQKVMIDIKPFSTLLLKLLYSAVLEE
RSLAAKRAFASSCATVLKYASPSQAQKLIEDTTSLHSGGKNDQLSGAILIKAYLSNAADI
LGGYNAVVVPVIFLSRFDDDKDTSALYEELWEDIPSSERVTLTLYLPETVSLLCNCMSSS
SWAGKRKSAKATKKLCDVIGESLSAHHHNILKSLLKELPGRFWEGKDAILDALASLCSCC
HAAIIAEDSSLPSGILDAVCAACNKKTKLYREAAFLCLQKVITAFRDPGFFNIIFPMLYK
VCNQSVICKAKGSSSTTSSAGAEQDESEGASVSLDKVLNCAMSCISIAFPHDIISQKKNV
LEVILNSLSPEESWQVKLSSFSCVKELCRKFQSSDDNGTWPQDTTSLVQELFHLVSAKVL
DSIRLIKIAQVHTAAAECLLELSKLYRDFPLTDRTEPKFEDELVELCESEKSEQAKTLLK
ECLGIVKTLPGITMATD
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcagccggcgccggcggccgcgcccgctccggccgccgcggagcagacggac
gcggagaggttggacgccctggaccggatgctcacgcggctggccctcgccgacgacgcc
cgcctcgcgccggtgctcgcgcgcgtcctcccctacgccatcacctcgctcgcctccccc
gcgcctgccgtccgcaagctcgttatggaaattctcagccacatcaacaaaagggtgaag
cacaggcctgagattccactgccgatgctggatttatggaagatttatacagaatctgct
tcctcaacaattgtcagaaacttctgcgtcgtatatattgagatggcgtttgaacgcctg
ccaacagaggagaaaggaaacattgcgcctgatttcttggccaatatatcaaatgttcca
gctcatcttcaagggatcatcttgagacttgtgacaaaggctatcggtgaatgtaacata
cataaggtggatgccaccattgcttcaaaatatcaagcaataactgaatccaatgacggt
ctagtatttgctgacttctgcttccatacattattgtatcaaacaccacctcagggtatt
ggatgtccatcaggactttcagttgcacaatcagatcgtgttactggaaaactaccacta
aaaggcgacatacttgcatcaagaaagctaggaatcttgaatgtcattgaagctatgaac
tttgcacctgagattgtctaccctctttatttatctgctgcttcagatagtcaagaatca
gtttctaagaaaggagatgagttgttaaagcgcaaagcatcaactgtgaatttagaagat
cccaacctcatcaagaaactgttcacgctgttcaatggtactgtgggtgcagaaaatata
gctgcagagctgaaagtttccccagcacatgcttcattgcgtatgcggcttatgagtgtt
ttctgccggtcaattgctgcagcgaatgcatttccacacacacttcaatgtatctttggc
tgtatctatggaagcggaactacttcaaggctgaagcagttaggaatggagttcactgtc
tgggttttcaaacatgcagtaaccgaccagctaaagttaatcggtccagttatccttagt
ggaatattgcgctcccttgatggttcttcctctacagagacagattctacaggtagagat
accaacatatttgcataccaggctatcggtttgctggcttctcgaatgccaaatttattc
agcgataaaaccgacatggctatacgactctttactgctttgagactggaggatcaatcg
cttcgtctgacaattcaggaggcggctacgtcccttgctacagcatataagggtgcttca
atgatagtactgaagaatcttgaggtgcttcttctggaaaattgtgaagcggagcaaagt
gaggttcggttttctgctataagatgggcaacaacattgtatgatacgcagcactgccca
agccggtacatttgcatgactggggcctcagatgtgaaactggacataagggaaatggct
ctagctggtctgaatcttctaaatgatgggaggcaatcatctgtgggatctgctgatttc
aaatatcctgatgttacagagatgctaaattatatctgccatcagagaccacagttgtta
tgttctgatgaccagacaaatggaaaattgctttttccttcaaaaacatttctttcaatg
atcaagtttctgatgaagtgctttgagtctagtgatagtccaaatcttgcgcaagaagat
ccatctcattccccagtagcaaaaatgtgtatcatcttagaaaatgcgatgtcatatgaa
gggtctagcgaactgcatgcattggccttgaagtcattggttgatctttcctctcgtcaa
ccaaagatggtgttattgcggtatgcagaccgcatacagtggctaagaggtctattgggt
catgttgattctgatgctcgtgaagctgcctcgcgtctgcttggtattgcttcttcagct
ctttcaagctctgctgcactaactcttctgtctgagttcacttcaacacttgatcaaaac
cgcccaacaagatttgaaaattatcatggactgttatgtgcgattggatatctaactgct
ggttgtttgaagcaatcttatatacctgaagaaatggtaaaaaatgtagttgatattctt
gtaaaagttatcgactctgaaggttcggcattagcatccgttgcaatggtatctcttggt
catattggtctacgttgtgcgctgccttccatcaaccaaaactcttctacaggtgctcta
ttaaccattctgcatgagaagctgactaagctgctttctgaaaatgatactaaggctatt
cagaaaattctggtatcattggggcacatatgttggaatgagatgtcctttccgcacctt
aataatgcactagacttgatttttagtctttcacgttctaaggtagaagatgttcttttt
gctgccggggaggctctatctttcatatggggagaagttcctgtgacagcagatgtgata
ctggagacaaactttggttccctttcccaggcaacaaactatcttactagtgacacacct
ctagtctcgagtaactcctatgaaagaagtgtctgtgaagaagcacacggaatggcccga
gaaaaaattattaaaaagttgtttgagacactaatttttagcagtagaaaagaagaacgc
tgtgccggtactgtctggttggtctctctgacaatgtactgcggtcgacatccgaagatt
ctagaactacttcctcaaatccaggaagctctttcccatctccttggtgatccaaatgag
cttacacaagatttggcatcccaagggatgagcattgtgtatgagcttggtgatgcatct
atgaaagagcagcttgttcatgctcttgtgaacacactgactggcgccgcaaagaagaaa
aaagctattaagttgatggaggactctgaggtctttcaagaaggcacaattggcaataat
cctactggagggaaacttaccacctacaaggagctgtgcagccttgccaatgagatgggg
caacctgacctcatatacaagttcatggatctagctaattatcaggctgctctcaattcc
aagaggggtgctgcttttggattttccaagatagccaaacaagctggcgaggcacttcaa
ccttatctgaatgccttaattcctaggcttgtccgttaccaatacgatcctgacaagaac
atccaggattcaatgggacacatctggaagttaattgtctcagatccaaaaaaagcaata
gatgaacattacgatgtcatagtagaggatttgttggttcaatctggatcaaggctttgg
cgctcacgtgaagcatcctgtcttgcacttgcagacatcatccaaggtcgaagatatagt
caggtttcaaagcatttgagaaaaatatggacaaccgccttccgtgcaatggatgacata
aaggaaactgtgcgtaatgctggtgacagtttgtgccgagccgtgagctcattgacaatt
aggctttgtgatgtgtcactaacttctacttctgatgcaaatgagacaatgaacattgtg
ctgccatacttgctttctgaaggcatactcagtaaagtttcaagtgttcaaaaagcctca
attagtttggtgatgaagcttgctaagggagctgggcctgcccttcggcctcatctggca
gaacttgttagttgtatgcttgaatgtttgtcaagtctggaggatcaaaggttgaattac
gtcgagatgcatgcaggaaatgctggcatcaaaacagataagcttgaaagcttgcggata
gctgtggctaaagattctccaatgtgggaaacccttgatatttgtataaaagttgttgac
aagaattcactcgatatattggtccctcgcctggcccaaatggttagatcagctgttggt
ttaaatacaagagttggtgttgctagcttcatcaccttgttggtacagaaggtcatgatt
gacatcaaaccattctcaacattgttactgaagttactgtatagtgctgttctggaggaa
aggagtttagcagcaaaaagggcctttgcgtcctcttgtgctactgttttgaaatatgct
agcccctcccaggctcagaagcttattgaagataccacctctctgcattctggtgggaaa
aatgatcagttatctggtgcaattcttattaaggcctacttgagcaatgcagcagatatt
cttggtggatataatgcagtggttgtccctgtaatttttttgtcaagatttgatgatgac
aaagataccagtgccttatatgaagaactttgggaggatattcctagcagtgaaagagta
accctaacactgtatttaccagaaactgtatctcttttgtgtaattgcatgtcatcgtca
tcatgggctggtaaaagaaagtcagccaaggctacaaagaagctatgtgatgttatcgga
gaatccctttcagctcaccaccataatattctcaaatcacttttgaaagaattgccaggt
cgattctgggagggaaaagatgctattctggatgcactggcttcattgtgttcttgctgt
catgctgctataatagcagaagactccagcttgccaagtggtatactagatgctgtttgt
gctgcatgcaataagaaaacaaaactgtaccgggaagcagctttcttgtgtttacagaaa
gtgatcacagcattcagagatccaggatttttcaatattatttttcctatgctgtacaag
gtttgcaaccaatctgtcatttgtaaggcaaagggttcatcttcaactacttcatctgct
ggtgctgaacaagatgaaagtgaaggtgcctccgtttctctagataaagtgctcaattgt
gccatgtcttgcatcagcattgcttttcctcatgatattatcagtcagaagaaaaatgtt
ttagaagtaatattgaattctctctcacctgaggagagttggcaggttaaattgtcgtcc
ttctcatgtgtcaaagagttgtgccgcaagtttcagagttctgatgataatggcacatgg
cctcaagacacaacttccttggttcaggagctattccatttggtgtcggcaaaagtacta
gactcaatacgcttaattaagattgctcaggtccatactgctgctgcagagtgccttctt
gagttgagcaaactgtatagagactttccattgacagacagaacagagcccaagtttgag
gatgaacttgttgagctctgcgagtctgaaaaaagtgaacaagcaaaaacattgttgaag
gaatgcctgggcatcgttaaaactctccctggaataaccatggcaactgattaa
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integrated database retrieval system
