Panicum virgatum (switchgrass): 120697681
Help
Entry
120697681 CDS
T07260
Name
(RefSeq) translocon-associated protein subunit beta-like
KO
K13250
translocon-associated protein subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120697681
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120697681
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
TRAP complex
120697681
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAP_beta
Phage_coat
DUF11
CARDB
Motif
Other DBs
NCBI-GeneID:
120697681
NCBI-ProteinID:
XP_039836906
LinkDB
All DBs
Position
3K:12628163..12630741
Genome browser
AA seq
194 aa
AA seq
DB search
MALSRRSLLVVVLGALAATATAAVGDAPFVVAHKKVALSRPVPGVERLAVTINLYNQGAA
TAYDVSLNDDSWPQEAFEIVSGSTSKIVEKLDPGATASHNFVLETKVQGRFQGSHAVIKY
RVFTNAALQEAYSTPTLALDILAERPPQQKFEWAKRLVGEYGPLVSALSSVGMFMYLVTS
PSKSSVVKGSKKKR
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtcgcggcgatctctcctcgtcgtcgtccttggcgcgctcgccgccactgcc
accgccgccgtaggggatgcgccgttcgtggtggcgcacaagaaggtcgccctctcccgc
cccgtacccggcgtcgagcgcctcgccgtcaccatcaacctctacaaccagggtgccgcg
actgcatatgatgttagcctgaatgatgactcttggccacaagaagcatttgagatcgtc
tctggaagcacgtcgaagatagtcgaaaagcttgatcctggtgctactgcttctcacaac
tttgttttggagacgaaagtacagggcagatttcagggttcccatgcggttattaagtac
cgtgttttcacaaacgctgcacttcaggaggcctattcaacccctaccctcgcacttgac
atccttgctgagagacccccacagcagaagtttgaatgggccaagagacttgtcggagaa
tacggcccgctggtgtcagccctttcctctgttggtatgtttatgtaccttgtcaccagc
ccttcaaaatcaagtgttgtaaaaggaagcaagaagaagcgctga
DBGET
integrated database retrieval system
