KEGG   Panicum virgatum (switchgrass): 120697868
Entry
120697868         CDS       T07260                                 
Name
(RefSeq) ribosomal L1 domain-containing protein 1-like
  KO
K14775  ribosome biogenesis protein UTP30
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvir03009]
    120697868
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    120697868
SSDB
Motif
Pfam: Ribosomal_L1
Other DBs
NCBI-GeneID: 120697868
NCBI-ProteinID: XP_039837167
LinkDB
Position
3K:16015481..16017167
AA seq 421 aa
MSPQPPHPVSRETVAGAVASLTKWMKKRAAEAPPNLLADERDDLVVLQLSLRRIPASPTT
KPRLLPLPHPVVGHDGASVCVISDDRPNSRSPPASVLLDASKSLHGLPVSEVIPLSTLRT
DYRPYESRRRLAASHDLFIADRAILPLLPRVLGKAFYSTKKAPIGVDFTRVGWPEQVRKV
LGSTFLYLRSGTCSGIKVGRLDMEEEEIVENVMAAVEAAAEKVPKKWANVRALHLKAVDS
VALPIYQVVPELGMKIEVPEEVESGEVIDAAELETRGKKTDKKKKALMNADANDDKGVAN
ESGKRKRNKKEQIKDVEMQEEVQAETEKKKRRKSIVVSVDEGQKVGKKGKDKGKRDLENE
VEEPSMDNKNKSKKGKIEEGKKKKNMKGDGEVSADKSHEDKKSKGEKSDGKIKKTRSKVR
V
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtcgccgcagccgccacacccggtgtcccgtgagacggtggccggcgccgtcgcctcc
ctgaccaagtggatgaagaagcgcgccgcggaggcgccccccaacctcctcgccgacgag
cgcgacgatctcgtggtcctccagctctcgctccgccgcatccccgcctcgcccaccacc
aaacctcgcctgctcccgctcccacaccccgtcgtcgggcacgacggcgcctccgtctgc
gtcatctccgacgaccgccccaactcgcggtccccgcccgcctccgtcctcctcgatgcg
tccaagtcgctccacggcctccccgtctccgaggtcatcccgctctccacgctccgcacg
gactaccgcccgtacgagtctcgccgccgcctcgccgcctcccacgacctcttcatcgcc
gaccgcgccatcctcccgctgctgccgcgcgtcctcgggaaggcgttctactccaccaag
aaggctccgattggagtcgatttcacccgcgtcgggtggccggagcaggtccgcaaggtg
ctgggctccacttttctctacctgcggtcggggacctgctcggggatcaaagttgggagg
ctggacatggaggaagaggagatcgtggagaatgtgatggctgcggtggaggcggctgcg
gaaaaggtgccaaagaagtgggccaatgttagggcgctgcatctgaaggctgtggattca
gttgccctgccaatttaccaggttgtgccagagttgggtatgaagattgaggtgcctgag
gaagttgaatctggggaggtcattgatgctgcggaattggagactagggggaagaagact
gacaagaagaagaaggcattgatgaacgctgatgccaatgatgataagggagttgccaat
gagagtggcaagaggaagaggaataagaaggagcagattaaggatgttgaaatgcaggaa
gaagttcaggcggagacagagaaaaagaagcgaaggaagagtattgtggtttctgttgat
gagggccagaaggttggcaagaagggtaaagataagggcaagcgcgatttggaaaatgag
gtggaagaacccagtatggacaataagaacaagagtaagaaggggaagattgaagagggg
aagaaaaagaagaacatgaagggtgatggtgaagtctcagcagataaaagccacgaagat
aagaagagcaagggggagaaatctgatggcaagatcaagaagacaaggagcaaggtaaga
gtataa

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