Panicum virgatum (switchgrass): 120702023
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Entry
120702023 CDS
T07260
Name
(RefSeq) cellulose synthase-like protein D5
KO
K20924
cellulose synthase-like protein [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120702023
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120702023
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cellulose_synt
Glyco_tranf_2_3
Motif
Other DBs
NCBI-GeneID:
120702023
NCBI-ProteinID:
XP_039841735
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All DBs
Position
4K:23239169..23248365
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AA seq
1053 aa
AA seq
DB search
MAGKAGKASAATLSVPPSGRLPSFSNDVSLDDAPEFAATMSGGTSDYANYTVLMPPTPDN
QPYSGGGGAPSSTSTGGSKPDDFPLPPYGPSASTKLVNRRGGAGGDDGAGGVSGKMDRRL
STARVAAPSKSLLVRSQTGDFDHNRWLFETKGTYGIGNAYWPQDNSAYADDDGGGAGGGP
VKMEDLVDKPWKPLSRKVPIPPGILSPYRLLVLVRFISLFLFLIWRATNPNLDALWLWGI
SIVCEFWFAFSWLLDQMPKLNPINRAVDLAALREKFESVTPTNPTGRSDLPGLDVFISTA
DPYKEPPLTTANSLLSILGTEYPVEKLFVYISDDGGALLTFEAMAEACEFAKVWVPFCRK
HSIEPRNPDSYFNQKGDPTKGKKRPDFVKDRRWIKREYDEFKVRINGLADLIRRRANAMN
ARERKLARDKQQQASSDGTPAADVPTVKATWMADGTHWPGTWLDSAPDHTKGDHASIVQV
MIKNPHYDVVPGDASSHPYLDLTGVDVRVPMFVYLSREKRPGYDHNKKAGAMNAMVRASA
ILSNGPFMLNFDCDHYIYNCTAIREAMCYMLDRGGDRICYIQFPQRFEGIDPSDRYANHN
TVFFDGNMRALDGLQGPMYVGTGCLFRRYAVYGFNPPRTTEYRGIYGQVKVPIDPAPHGH
GHHPEAAAPDHPDHEAPQRFGKSKMFIETIAVAEYQGRPLQDHPSVQNGRPPGALLMPRP
PLDAATVAESVAVISCWYEDGTEWGLRVGWIYGSVTEDVVTGYRMHNRGWRSVYCITRRD
AFRGTAPINLTDRLHQVLRWATGSVEIFFSKNNAFLASRRLKFLQRLSYLNVGIYPFTSL
FLIMYCLLPALSLFSGQFIVATLDPTFLCYLLLITITLMLLCLLEVKWSGIGLEEWWRNE
QFWVIGGTSAHLAAVLQGLLKVIAGIEISFTLTAKAATEDDDDPFAELYLVKWTSLFIPP
LAVIGINIIALVVGVSRTVYAEIPQYSKLLGGGFFSFWVLAHYYPFAKGLMGRRGRTPTL
VYVWAGLISITVSLLWITISPPDDRITQGGIDV
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaagccgggaaggcgtcggcggcgacgctgtcggtgccgccgagcgggcgc
cttcctagcttctcaaacgacgtcagtctcgacgacgcgccggagttcgccgccaccatg
tccggcggtactagcgactatgccaactacaccgtcctcatgccacccaccccggacaac
cagccctacagtggcggcggtggcgcaccgtcctcaacgtccacgggtggctccaagcca
gacgatttccccttgccaccctatggcccgtcggcgtccactaagctcgtcaaccggcgc
ggaggtgccggaggggacgatggcgctggcggcgtcagcggcaagatggaccggcggctg
tccacggcgcgcgtggcggcgccgtccaagtcgctgctggtgcggagccagaccggggac
ttcgaccacaaccggtggctgttcgagaccaagggcacgtacggcattggcaacgcgtac
tggccgcaggacaacagcgcgtacgccgacgacgacggcggcggcgctggcggcggcccc
gtcaagatggaggacctcgtggacaagccgtggaagccgctcagccggaaggtgcccatt
ccgcccggcattctcagcccctacaggttgctggtgctggtgcgcttcatctcgctgttc
ctgttcctgatctggcgcgcgacgaaccccaacctggacgcgctgtggctgtgggggatc
tccatcgtgtgcgagttctggttcgccttctcttggctgctggaccagatgcccaagctg
aacccgatcaaccgggccgtggacctcgccgcgctccgggagaagttcgagtccgtgacg
ccgaccaacccgacgggccgctccgacctccccgggctggacgtcttcatctccaccgcc
gacccctacaaggagccgcccctgaccacggccaactcgctgctctccatcctcggcacc
gagtacccagtggagaagctcttcgtctacatctccgacgacggcggcgcgctgctgacc
ttcgaggcgatggcggaggcgtgcgagttcgccaaagtgtgggtgcccttctgccgcaag
cactccatcgagccgcgcaacccggactcgtacttcaaccagaagggcgaccccaccaag
ggcaagaagcggccggacttcgtcaaagaccggcggtggatcaagcgggagtacgacgag
ttcaaggtccgcatcaacgggctcgcggacctcatccgccggcgcgccaacgcgatgaac
gcccgcgagcgcaagctcgcccgcgacaagcagcagcaggcgtcctccgacggcacccct
gccgccgacgtgccgaccgtgaaggcgacgtggatggccgacggcacccactggccaggc
acctggctggactcggcccccgaccacaccaagggcgaccacgcgagcatcgtgcaggtg
atgatcaagaaccctcactacgacgtggtccccggcgacgcctcgtcgcacccgtacctg
gacttgacgggcgtggacgtgcgcgtgcccatgttcgtgtacctctcccgcgagaagcgc
cccgggtacgaccacaacaagaaggccggcgccatgaacgccatggtgcgcgcgtcggcc
atcctctccaacgggcccttcatgctcaacttcgactgcgaccactacatctacaactgc
acggccatccgcgaggccatgtgctacatgctcgaccgcggcggcgaccgcatctgctac
atccagttcccgcagcgcttcgagggcatcgacccctccgaccgctacgccaaccacaac
accgtcttcttcgacggcaacatgcgcgcgctcgacggcctccagggccccatgtacgtc
ggcaccggctgcctcttccgccgctacgccgtctacggcttcaacccgccgcgcaccacc
gagtaccgcggcatctacggccaggtcaaggtgcccatcgacccggccccgcacggccac
ggccaccaccccgaggcggcggcgcccgatcaccccgaccacgaggcgccgcagcgcttc
ggcaagtccaagatgttcatcgagaccatcgccgtggccgagtaccagggccgcccgctg
caggaccacccgtccgtgcagaacggccggccccccggcgcgctgctcatgccgcgcccg
ccgctggacgccgccacggtggccgagtccgtggccgtcatctcctgctggtacgaggac
ggcaccgagtgggggctgcgcgtcggctggatctacggctccgtcaccgaggacgtggtc
accggctaccgaatgcacaaccgcgggtggcgctccgtctactgcatcacccgccgcgac
gcgttccggggcacggcgcccatcaacctcaccgaccgcctccaccaggtgctgcgctgg
gccaccggctccgtggagatcttcttctccaagaacaacgccttcctggcctcccgccgg
ctcaagttcctgcagcgcctctcctacctcaacgtcggcatctacccgttcacctccctc
ttcctcatcatgtactgcctcctgccggcgctgtccctcttctcgggccagttcatcgtg
gccacgctggacccgaccttcctctgctacctcctgctcatcaccatcacgctcatgctg
ctctgcctgctggaggtcaagtggtccgggatcggcctcgaggagtggtggcgcaacgag
cagttctgggtcatcggcggcacgtccgcgcacctggcggccgtgctgcagggcctgctc
aaggtcatcgccggcatcgagatctccttcacgctcacggccaaggccgcgacggaggac
gacgacgaccccttcgccgagctctacctcgtcaagtggacctccctcttcatcccgccg
ctcgccgtcatcgggatcaacatcatcgcgctcgtcgtcggcgtgtcgcgcaccgtgtac
gccgagatcccgcagtacagcaagctgctgggcggaggcttcttcagcttctgggtgctc
gcgcactactacccgttcgccaaggggctcatggggcggcgcggccgcacgcccaccctc
gtctacgtctgggcggggctcatctccatcaccgtctccctgctctggatcaccatcagc
ccgccggacgacaggatcacacagggcggcatcgatgtgtga
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