Panicum virgatum (switchgrass): 120704542
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Entry
120704542 CDS
T07260
Name
(RefSeq) 1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic isoform X1
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120704542
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120704542
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
120704542
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120704542
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase_C
CBM_48
Alpha-amylase
Motif
Other DBs
NCBI-GeneID:
120704542
NCBI-ProteinID:
XP_039844902
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Position
4K:complement(47365515..47372507)
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AA seq
845 aa
AA seq
DB search
MFLQPPCYSGTECLRARRSPSSSSNGITIPVKKNLSFLSDSLLPCFSFPGGDDWARGGAI
SPVFARPFAGEERILQSKSKFATAATVQEDKTMAASQDDVDHLPIYKLDPDLEKFKDHFS
YRMKRYLDQKCSIEKNEGSLEEFSKGYLKYGINTNKDATVYREWAPAAQEAQLIGDFNDW
NGANHQMEKDKFGVWSIKIDHVKGKPAIPHNSRVKFRFRHGGVWVDRIPAWIRYATVDAS
KFGAPYDGVHWDPPASERYMFKHPRPSKPVAPRIYEAHVGMSGEKPAVSTYREFADNVLP
RIRANNYNTVQLMAVMEHSYYASFGYHVTNFFAVSSRSGTPEDLKYLVDKAHSLGLRVLM
DVVHSHASNNVTDGLNGYDVGQSTQESYFHTGDRGYHKLWDSRLFNYANWEVLRFLLSNL
RYLMDEFMFDGFRFDGVTSMLYHHHGINVGFTGNYKEYFSLDTDVDAVVYMMLANHLMHK
ILPEATVVAEDVSGMPVLCRPVDEGGVGFDYRLAMAIPDRWIDYLKNKEDSEWSMGEIAH
TLTNRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYTGMSDLQPASPTIDRGIALQKM
IHFITMALGGDGYLNFMGNEFGHPEWIDFPREGNNWSYDKCRRQWSLVDTDHLRYKYMNA
FDQAMNALDEEFSFLSSPKQIVSDMNEEKKVIVFERGDLVFVFNFHPKNTYDGYKVGCDL
PGKYRVALDSDAFVFGGHGRVGHDVDHFTSPEGVPGVPETNFNNRPNSFKVLSPPRTCVA
YYRVDEEAETTGAGKTSPEIIDVDATTLKTPTATTEACEERESTEDVSGKKGRKFGRQSS
DKSTK
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtttctccaacctccgtgctactctgggacggagtgcctacgggcacggagaagcccc
tcctcctcgagtaatggaatcactattcccgtcaaaaaaaacctttcttttctctcggac
tctctcctcccttgcttttccttccctggcggcgacgactgggcgagaggcggcgccatt
tctcctgtcttcgcccggccctttgccggcgaagagcgcatcctccagtccaagagcaaa
ttcgccactgccgcgactgtgcaagaagataaaactatggcagcttcccaggacgatgtc
gaccatcttcccatatacaagctagaccccgacttggagaaattcaaggaccatttcagc
taccggatgaaaagatacctggaccagaaatgttccattgagaaaaatgaggggagtctt
gaagaattttctaaaggctatttgaagtatgggatcaatacaaacaaggatgcaactgta
tatcgtgaatgggcacctgctgcacaggaggcacagcttattggtgacttcaatgactgg
aatggtgcaaaccaccagatggagaaggataaatttggtgtttggtcaattaaaattgac
catgtcaaagggaaaccggccatccctcataattccagggttaaatttcgctttagacat
ggtggagtatgggttgatcgaattcctgcgtggattcgttatgcaactgttgatgcctct
aaatttggagctccctatgatggtgttcattgggatcctcctgcttctgaaaggtacatg
tttaagcaccctcggccttcaaagcctgttgctccacgtatctatgaagcccatgtgggg
atgagtggtgaaaagccagcagtaagcacatatagggaatttgcagacaatgtgctgcca
cgcatacgagcaaataactataatacagttcagttgatggcagttatggaacattcttat
tatgcttcgtttgggtatcatgtgacaaatttctttgcagttagcagcagatcaggcaca
ccagaggaccttaaatatcttgttgataaggcacacagtttgggattgcgagttctaatg
gatgttgtccatagccatgcaagtaataatgtcacagatggtttaaatggctatgatgtt
ggacaaagtacccaagagtcctattttcatacgggagataggggctatcataaactttgg
gatagcagactgttcaactacgctaactgggaggtattgaggtttcttctttctaacctg
agatatttgatggatgaattcatgtttgatggcttccgatttgatggagttacatcaatg
ctgtatcatcaccatggtattaatgtgggatttactggaaattacaaggagtatttcagt
ttggacacagatgtggatgcagttgtttacatgatgcttgcaaaccatttaatgcacaaa
atcctgccagaagcaactgttgttgctgaagatgtttcaggcatgccagtcctttgtcgg
ccggttgatgaaggtggagttgggtttgactatcgcctggcaatggctatccctgataga
tggattgactacctgaagaacaaagaagactctgagtggtcgatgggtgaaatagcgcat
actttgactaacaggagatatactgaaaaatgcattgcatatgctgagagccatgatcag
tctatcgttggcgacaaaactatagcatttcttctgatggacaaagaaatgtacactggt
atgtcagacttgcagccggcttcacctaccattgatcgtgggattgcactccaaaagatg
attcatttcatcacaatggctcttggaggtgatggctacttgaattttatggggaatgag
tttggtcacccagaatggatcgactttccaagagaagggaacaactggagttatgataaa
tgcagacgtcagtggagccttgtggacactgatcacttgcgatacaagtacatgaatgca
tttgatcaagcaatgaatgcgctcgatgaggaattttccttcctttcatcaccaaagcag
attgtaagtgacatgaatgaagagaaaaaggttattgtattcgaacgtggagatctggtt
tttgttttcaattttcatcccaagaatacttatgatgggtacaaagttggatgcgatctg
cccgggaaatacagagtagcactggattctgatgcttttgtctttggtggacatggaaga
gttggccatgacgttgatcacttcacgtcgcctgaaggggtaccaggggtgcctgaaaca
aacttcaacaaccgcccaaactcattcaaagtcctttctccaccgcgcacttgtgtggct
tactaccgtgtggatgaagaggctgagacaactggtgctggaaagacttctccagaaatc
attgatgttgatgcaaccaccctcaaaacacctacagctactacagaagcgtgtgaggaa
agagaatcgacagaggatgtttctggcaagaagggaaggaagtttgggcgtcagtcatct
gataaaagtaccaaatga
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