Panicum virgatum (switchgrass): 120706237
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Entry
120706237 CDS
T07260
Name
(RefSeq) beta-1,3-galactosyltransferase GALT1-like isoform X1
KO
K14413
beta-1,3-galactosyltransferase [EC:2.4.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00513
Various types of N-glycan biosynthesis
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
120706237
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120706237
Glycosyltransferases [BR:
pvir01003
]
Glycan extension
N-Glycan
120706237
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GFIT
Motif
Pfam:
Galactosyl_T
Gal-bind_lectin
Fringe
Motif
Other DBs
NCBI-GeneID:
120706237
NCBI-ProteinID:
XP_039846759
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Position
1K:38468595..38475677
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AA seq
644 aa
AA seq
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MWMTNKLAITVSIIAFSLVIVRYLIVSSATSGISRYQILDTNPLEWLNRPVEAKETIPGA
AATDASTSNSSDFRSSSPEVFQWLDTWNQMKQLSNITNGLPHASEAINDGRTAWENLTAS
AHNASYKQRKKERLCPYSIRRMDASKLETDSFTIDVPCGLIVGSSITLIGTPGVLSGNFW
IDLVGTALPGESEKPTVLQYNVRLNGDKITKDPVILQNTFTANNGWGVEDRCPSTNSNNA
TEVDDLERCNAMVGREGRDIMNSKHHTAAKKHGEPSTYFPFKQGYLAIATLRVGLEGIHM
TVDGKHITSFAYRAGLEPWFVTEVRISGDFKLVSAIASGLPTSEDLENSNIEMLKSSPVP
AGKDVDLLIGIFSTANNFKRRMVIRRTWMQYDAVRQGAVAVRFFVGLHTNLMVNEELWNE
ARTYGDIQVLPFVDYYSLITWKTLAICIYGVNIIITKLHFSIPCFSSFSVLNCVLCDQTS
AVFAKYVMKTDDDAFVRVDEIRSTIKQLNVSNGLLYGRIDSDSSPHRNPESKWYISQEEW
PEEKYPPWAHGPGYVVSQDIAREINTWYKASHLKMFKLEDVAMGIWVNDLKKDGLPVKYE
TDTRINIDGCNDGYIVAHYQEPRDMLCLWEKLLRTHQAHCCNTD
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtggatgacaaataagctcgccattacagtttcgatcatcgccttctctctggtgatc
gtgcggtacttgatagtgagcagcgcaacttcagggatatctcggtatcaaatcctcgat
accaatccccttgagtggctcaataggccagtggaagcaaaagaaaccattccaggagca
gcagcaacagatgcttcaacttcaaacagctcggatttcaggagctcctctccagaagtg
tttcagtggctagacacatggaaccagatgaagcagctatccaacatcaccaatggtctt
cctcatgcaagcgaggcgatcaacgatggaagaactgcatgggaaaacttgacagcatca
gctcacaatgcaagctataagcaaaggaaaaaagagaggctgtgcccatactcgattcgc
agaatggacgcttccaagttggagactgattctttcaccattgatgtaccttgtgggttg
attgtcggttcttcgataactcttataggcactcctggagtcctctctggtaacttttgg
attgatcttgtcgggacagcacttccaggggaatctgaaaagcctactgtactgcagtac
aatgtccgtctaaatggcgacaaaattactaaagatccagtcatattgcagaatacattc
actgcgaacaatggctggggggtcgaggatcgctgtcccagcactaactctaacaatgca
accgaagtggacgatttggagagatgtaatgcaatggtgggcagagaaggcagggacata
atgaactcaaaacatcatacagctgccaaaaaacatggagaaccaagcacatattttcca
tttaaacagggatatcttgctatcgcaacgctccgtgtaggattggaggggatccatatg
acagttgatggaaaacacatcacttcattcgcatatagagcgggtttggaaccttggttt
gttactgaagtaagaatttctggtgatttcaaacttgtgagtgcgattgcaagcggcttg
cccacatcagaagacttggagaactctaatattgaaatgctgaagtcatcacctgttcca
gctggcaaagatgtagaccttctgattggcatattttcaacagcaaacaacttcaagcgc
aggatggtaattcgaaggacgtggatgcaatatgatgccgtgcgccaaggagcagtagca
gtacggttttttgttggcctgcatacaaacctcatggtaaacgaagaactctggaatgag
gcacgcacatatggtgacatccaggtgttgcccttcgtagattactacagcctgataaca
tggaagacactagcaatatgcatctatggggtaaacattattatcacaaagttacacttc
tccattccctgcttctcgtcattcagtgtgcttaactgtgttttgtgtgaccagaccagt
gctgtatttgccaagtatgtgatgaaaacagatgatgatgcttttgtccgtgtagatgag
atccgatccacaataaaacagcttaatgtcagcaatgggctactttatggtcgcatagat
tctgactcaagtccccacagaaatccagaaagcaaatggtacataagccaagaggagtgg
cctgaagagaaatacccaccatgggctcatggaccaggatatgtggtctcccaagacatt
gcaagggaaatcaacacttggtataaagcaagccatttaaagatgttcaaactagaagat
gtagcaatgggcatatgggtcaatgatctgaagaaggatggattaccagtaaaatacgaa
acagacacaagaattaacattgacggttgcaatgatgggtacattgttgctcactaccaa
gaaccaagagatatgctatgcctgtgggagaagctcctaaggacgcatcaagcacattgc
tgcaatactgactaa
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