KEGG   Panicum virgatum (switchgrass): 120706245
Entry
120706245         CDS       T07260                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 homolog
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    120706245
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pvir03400]
    120706245
DNA repair and recombination proteins [BR:pvir03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     120706245
SSDB
Motif
Pfam: HD HD_assoc_2 GyrB_insert
Other DBs
NCBI-GeneID: 120706245
NCBI-ProteinID: XP_039846766
LinkDB
Position
5K:complement(10606351..10614632)
AA seq 490 aa
MGEYCATPEADSALAAAAALTFPSQSPAAAAARPRYGSCDRRFVKQVFDNLHGSISLDPL
ALQFVDTEEFQRLRDLKQLGLTYLVYPGAVHTRFEHSLGVYSLAGKAMNNLKTYQGEELG
IDCIDMQTVKLAGLLHDIGHGPFSHLFEHEFLPRVDPGSTWSHENMSALLLDSIVDKHAI
DIEDDYLKMVKEMIIASSKSATMKSAKDKHFLYDIVANGRNGIDVDKFDYIDRDCRACGL
GSNFQYWRLMEGMRVMGDEICYPAKDYLSIHKLFSTRADLHRTVYTHAKVKAVELMLVDA
LIEANDYLGISWHANDPEDFWKLDDTIIKSIETAPNNELKKAKEIIQRIRRRELYKFCNQ
YSVPKDKLEHFKNITSQDIVCSQKSSGVLLKEEDVVVSNVKIDLTRGKDNPLESIKFFKD
FGCDEKFPITDDRVSHLLPAYNEDRIVRVYAKKPELVEAVSEAFENLQLRMYGEKTQVHD
TPKKKRMRSL
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgggcgagtactgcgccaccccggaggcggactccgcgctggcggcggcggcggccctg
acgttcccctcccagtcccctgcggcggcggcggccaggccgcggtacgggagctgcgac
cgccggttcgtgaagcaggtgttcgacaacctccacgggagtatctcgctcgacccgctt
gctctgcagtttgtggacaccgaagagtttcagaggctgagggacctaaaacaacttggt
cttacatatctggtctatcctggagctgttcacacacgctttgaacattcattaggagtt
tattcgttagctgggaaggctatgaacaatcttaaaacgtatcagggagaggagcttggt
attgattgtatcgacatgcaaactgtgaagcttgcaggcctcttgcatgatattggacat
ggccccttcagtcatttgtttgagcatgagtttcttcctcgtgttgaccctggctcaacc
tggtcccacgaaaatatgtcagcactgctgttggacagtatcgttgacaaacatgcaata
gatatagaagatgattatctgaaaatggtcaaggagatgataattgccagctctaagtct
gccaccatgaaaagtgcaaaggataagcattttctttatgacattgttgctaatggccgc
aatggcatagatgttgacaagttcgactacattgaccgtgattgcagagcatgtggtctt
ggctctaatttccagtactggaggttgatggagggcatgcgagtgatgggtgacgaaatt
tgctaccctgccaaagattacttgagcatccataaattgttttcaacacgtgctgatctg
caccggactgtctacacccacgccaaagtaaaggctgttgaactcatgctcgtggacgca
ctcatcgaggctaatgattacttaggaatatcatggcacgcaaatgatccagaagatttt
tggaagttggatgacacaatcattaaaagcattgaaactgcccccaataatgaactgaag
aaagcgaaagaaatcattcaacgtattcgccgaagagaactctacaagttttgcaatcag
tattcggttccaaaggacaagctggagcatttcaaaaatataacttcacaggacatagtt
tgttcacagaaatcttctggggtgctgctgaaggaagaggacgttgttgttagcaatgtt
aagattgatcttactcgtggaaaagataaccctcttgaaagcatcaagttctttaaggat
tttggatgcgatgagaagttccccatcacagatgaccgggtcagccacttgctacctgcc
tacaatgaagatagaattgtgagggtctatgctaagaagcctgagctggtggaagccgtc
tcagaagcctttgagaacctccaactgagaatgtatggtgagaagactcaagtgcacgat
acacccaagaagaagcggatgagatccctttag

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