Panicum virgatum (switchgrass): 120707036
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Entry
120707036 CDS
T07260
Name
(RefSeq) serine/threonine-protein kinase RIO1-like
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
120707036
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
pvir01001
]
120707036
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120707036
Enzymes [BR:
pvir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120707036
Protein kinases [BR:
pvir01001
]
Serine/threonine kinases: Other
RIO family [OT]
120707036
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-40S particles
Kinases
120707036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
Pkinase
B3R
Pkinase_fungal
TCAD9
Motif
Other DBs
NCBI-GeneID:
120707036
NCBI-ProteinID:
XP_039847732
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All DBs
Position
5K:28316462..28319826
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AA seq
383 aa
AA seq
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MQANVYHATKAEGQELAIKVYKTSVLVFKDRDRYVQGDYRFRHGYCKHNPRKMVKTWAEK
EMRNLLRVRAAGIRCPKPLLLRLHVLVMEFIGKGGWAAPRLKDAALSDDKLRESYFEIIT
TMRTLYQNCKLVHGDLSEYNILYFEGHLYIIDVSQSVDLDHPSALDFLKEDCLHVSDFFK
KRGVAVMTVTDLFNFVIDQNIADEDVDSYLDKVQQKIVENGGTDTNDEICPTVMVQTLDY
AKRCEADLVNMSMMQRSSFGYEPPADKLYDQPLLGFVRTKNAHAENQQKQLPQNTMEETL
DLQNKCSLEDKVEDQEDNSESCSSSDEDSSWEEAPKMGPEERKTARKENKKKVKEEKREA
RKTKIPKAEKKKRKKMAKAKCKR
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcaaatgtctatcatgcaacaaaggcggagggtcaggagttagcaattaaagtc
tacaaaacctctgtccttgtttttaaggatcgcgaccggtatgttcaaggagattatcgt
tttaggcatggttactgcaagcataatccacggaaaatggttaagacctgggctgaaaag
gaaatgagaaaccttctacgagtgagagcagctggaatcagatgccctaaaccgttgcta
ttgaggcttcatgtattggtgatggaattcatagggaaaggaggttgggctgctcctcgt
cttaaggatgctgctttgtcagatgacaagttgcgtgaaagttactttgagataattaca
acaatgcggacactttaccaaaattgcaagttggtccatggagatttgagtgagtacaat
attctttatttcgagggccacttgtacattattgatgtttcacaatctgttgaccttgat
cacccttcagcattggacttcttaaaggaagattgcttgcatgtttctgacttctttaag
aaacgaggcgttgcagtcatgacggtaacagatttatttaattttgttattgaccaaaac
attgctgatgaggatgtcgatagttacctggataaggttcagcaaaagatcgtggaaaac
ggtggtacagatacaaatgatgaaatttgtccaacagtcatggtgcaaactttggattat
gcgaagcgatgcgaggcagatttagtcaacatgtcaatgatgcaacgctcatcctttggt
tacgagccaccagcggataagctttatgaccaaccactattaggatttgtacggacgaaa
aatgcacacgctgaaaatcagcaaaaacaattgccacagaatacaatggaagaaaccttg
gatctgcaaaataagtgctcattggaggacaaagtggaagatcaagaagacaatagtgaa
tcttgctcaagttctgatgaagacagttcgtgggaggaggctcccaaaatgggacctgag
gaaaggaagactgctcggaaagagaacaagaagaaggtgaaggaagagaagagagaagct
cgcaagacaaagatcccaaaggctgagaagaagaaaaggaagaaaatggcaaaagcaaag
tgcaagcgttag
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