Panicum virgatum (switchgrass): 120707541
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Entry
120707541 CDS
T07260
Name
(RefSeq) putative fatty-acid--CoA ligase fadD25
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
120707541
NCBI-ProteinID:
XP_039848391
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Position
5K:complement(41161856..41164095)
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AA seq
665 aa
AA seq
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MSTENYDPCYPDQPVVDQYLPVWARQPAFGPKPAFIWADDDRRAGGGGGSPSYAAVTYSE
LNAAAQWMALGLLETVRRGDTVLLLAAPGLRLVKLIFACQRAGLVAVPMSPPDPSKLGAS
AAHRRLLRAVAQTRPAAAVADAGYIGAVMECPVAELKRLRWVPAGHLESRRAPGDAATAA
AASGGPGYYGGCAAGETYLIQYTSGATGAPRPVVVTAGAAAHNVRAARKAYGLHPGSVVA
SWLPQHHDCGLMFLLLTVVAGATCVLASPAAFVRRPRLWLELVAEFRATCTPVPSFALPL
VLRRGRRPGRGARPLDLGTLRNLILVNEPIYESSVVEFVEEFGRAGLDAAAISPSYGLAE
NCTFVSTAWRGTEAKLPSGRWLSLPSYKKLLPSARLPPLLASSPREEPEIDIAIVDGQTG
EPVEDGVEGEIWVSSPSNASGYLGQLSASREVFGARLPGRAAGARFVRTGDCGVVRGAER
YLYVLGRSADAIAIATGDGRRRVHAHYVETAAFGSSPGSLRGGCVAAFATPLTSASSVVV
VAELQKGRSNNVHPSSICDSIRRAVWEQEGVKVGHVVLAEIGAVPKTTSGKLRRGSAREM
LAGELIPKVFEALYDEDDKGGGNEVEVRGTSWAPGEAGSGEVAAGMVVMASGSASSQRLR
LQSSL
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgagaactacgacccctgctaccccgaccagccggtggtcgaccagtacctc
ccggtgtgggccaggcagccggcgttcggccccaagcccgccttcatatgggccgacgac
gaccggcgtgccggcggcggcggcggctcgccgtcgtacgccgcggtgacgtactccgag
ctgaacgccgccgcgcagtggatggctctcggcctgctcgagaccgtgcgcaggggcgac
accgtcctcctgctcgcggcgccgggcctccgcctcgtcaagctcatcttcgcgtgccag
cgcgcggggctcgtcgcggtgcccatgtcaccgccagacccgtccaagctcggcgcgtcc
gcggcccaccgccgcctcctgcgcgccgtggcgcagacgaggccggccgccgccgtcgcc
gacgcggggtacattggcgcggtcatggagtgccccgtcgccgagctgaagcgtctccgg
tgggtgccggcgggccacctggagagccgccgggctccgggtgacgcggccaccgccgcc
gccgccagtggcgggccggggtactacgggggatgcgcggcgggcgagacgtacctgatc
cagtacacgtcgggggccaccggcgccccgcggcccgtcgtggtcaccgcgggcgcggcg
gcgcacaacgtgcgcgccgccaggaaggcctacggcctccacccgggcagcgtcgtcgcg
tcgtggctgccgcagcaccacgactgcggcctcatgttcctcctcctcaccgtcgtcgcc
ggcgccacgtgcgtgctcgcctcgcccgcggccttcgtccggcgcccgcgcctctggctc
gagctcgtcgccgagttcagggccacgtgcacgccggtcccgtcgttcgcgctgccgctg
gtgctccggcgaggccgccgcccggggcgcggggcgcggccgctcgacctcgggaccctg
cggaacctcatcctggtgaacgagcccatctacgagtcgtcggttgtcgagttcgtggag
gagttcggccgtgccggccttgacgcggcggccatctcgccgtcctacgggctagcggag
aactgcacgttcgtgtccaccgcgtggcgcgggacggaagccaagcttccgagcggccgc
tggctgagcctcccatcgtacaagaagctcttgccgtccgccaggctgccgcccctgctg
gcgtcgtctccccgcgaggagccggagatcgacatcgccattgttgatgggcagaccgga
gagcccgtggaggacggcgtcgagggggagatttgggtgtcctcgccgagcaacgcgtcg
gggtacctcgggcaactgtcggcgagccgcgaggtgttcggcgccaggctgccagggaga
gccgccggcgctcgcttcgtgcgtacgggcgactgcggcgtggtgcgcggagcggagcgg
tacctctacgtgcttggccggagcgcggacgccatcgccatcgccaccggcgacgggcgg
cggcgcgtgcacgcgcactacgttgagacggcggcgttcggcagctcgccgggctcgctg
aggggaggctgcgtcgccgcctttgccacgccgttgacgtcggcgtcgtccgtcgtggtc
gtggcggagctgcaaaagggaagaagcaataatgtgcatccgagcagcatctgcgacagc
ataagacgagccgtgtgggaacaggagggtgtgaaggtcgggcacgtcgtgctggccgaa
atcggcgccgtgccgaagactacgtcggggaagctgcggcgaggctcggcgagggagatg
ctcgccggcgaactgatccccaaggttttcgaggcgctgtacgacgaagacgacaagggc
ggcggcaatgaggtggaggtgcgcgggacgagttgggcgccgggagaggccggatcaggg
gaggtcgctgctggcatggtcgtcatggccagcgggagtgctagtagtcaacgcctgcgt
ttgcagtcatctctctga
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