Panicum virgatum (switchgrass): 120707870
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Entry
120707870 CDS
T07260
Name
(RefSeq) RGG repeats nuclear RNA binding protein C-like
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120707870
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120707870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
120707870
NCBI-ProteinID:
XP_039848859
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All DBs
Position
5K:complement(46784637..46787798)
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AA seq
376 aa
AA seq
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MATLNPFDLLGADDGDDPSQLIAAAAAAAQKAEAKKAAAAPAGKAAQPAAAVKFPTKPAP
PSQAVRDARGGGAPARGGYGRGERGRGRGGRGYGQNRDFGGESANGFQGGYGGGGFGDGA
VTGGAEGERERGPRPPYRGGGRRGGYRNGEFGDDSERPPRRNYERHSGTGRGYEMKRDGA
GRGNWGTATDEVLAQETEEALKVEEDAPIAEKQGEQNDAPATDENKDNKDAAAEEEEKEE
DKEMTLEEFEKIREEKRKALLSLKTEERKVEVDKDLQSLQPLSNKKENDEVFIKLGSDKD
KKKESAERDERAKKSLSINEFLKPAEGERYYGGRGRGRGRGERGGFRGGYAGGYSRGPAA
APSIEDQAQFPSLGGK
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggccaccctcaacccgttcgacctcctcggcgccgacgacggcgatgacccctcgcag
ctgattgccgccgcggcggcggcggcgcagaaggccgaggcgaagaaggccgccgcggcg
cctgctgggaaggcggcccagcccgcagcggccgtcaagttcccgactaagcccgctccc
ccctcgcaggctgtgagagatgcacgtggaggcggtgcaccagctcgtggtggctatggc
cgtggcgaacgtggccgtggcagaggtggacggggatatggccagaaccgtgacttcggt
ggtgaatctgccaatggcttccagggaggttatggtggcggaggctttggggatggtgct
gtaactggtggagctgaaggggaaagggagagaggccctcgccccccttaccgtggagga
ggcagacgtggtggctacaggaatggtgagtttggcgatgactctgagaggccacctagg
agaaactatgaacgccacagtggaactggccgtgggtatgagatgaagcgtgatggcgca
gggcgtgggaactggggaactgccaccgatgaagttcttgcgcaggaaactgaggaagct
ctcaaggtggaggaggatgctcctattgctgagaaacagggcgagcagaatgacgcccca
gcaacagatgagaacaaagataacaaggatgctgctgctgaggaggaagagaaggaagag
gacaaggagatgactctggaggagttcgagaaaataagggaggagaagaggaaagcacta
ctttcattgaagactgaagagaggaaggttgaagttgataaggatctacagtctctgcag
ccactctcaaacaagaaagaaaatgatgaagttttcattaagctgggttctgacaaggat
aagaagaaggaaagtgctgagcgtgatgagcgcgccaagaagtcgctgagcatcaacgag
ttcctgaaacctgctgaaggagaaaggtactatggtggtcgcggtcgtggaaggggccgt
ggggagcgtggtggttttagaggtggatatgctgggggttacagtcgcggcccagctgct
gccccatccattgaagatcaagctcagttcccaagccttggtgggaagtga
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