Panicum virgatum (switchgrass): 120707946
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Entry
120707946 CDS
T07260
Name
(RefSeq) respiratory burst oxidase homolog protein A-like
KO
K13447
respiratory burst oxidase [EC:1.6.3.- 1.11.1.-]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04016
MAPK signaling pathway - plant
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
120707946
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120707946
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NAD_binding_6
NADPH_Ox
FAD_binding_8
Ferric_reduct
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
120707946
NCBI-ProteinID:
XP_039848942
LinkDB
All DBs
Position
5K:47537530..47546488
Genome browser
AA seq
950 aa
AA seq
DB search
MRGGAAPAAAGAGHHQRWSASAGTTPRSLSTGSSPRGSDRSSDDGEELVEVTLDLQEDDT
IILRSVEPAAAAAGASRLPLGARGDHAGGGGASSSSRSRSPSIRRTSSHRLLQFSQELKA
EAMSIARQFSQDLTKRFGRTHSRAESQGQQPTSGIESALAARAARRQRAQLDRTRSGAHK
ALRGLRFISSNKANNAWMEVQANFDRLACDGFLSRADFAECIGMTESREFALELFDTLSR
RRQMQVDKINKEELREIWQQITDNSFDSRLQIFFDMVDKNADGRIGEEEVKEIIMLSASA
NKLSRLKEQAEEYAALIMEELDPEGLGYIELWQLETLLLQKDTYMNYSQALSYTSQALSQ
NLAGLRTKSPIRKLRTTLSYYLEDNWKRLWVLALWIGIMAGLFTWKFMQYRNRYVFNVMG
YCVTTAKGAAETLKLNMAIILLPVCRNTITWLRNTRAARALPFDDNINFHKTIAAAIVVG
IILHAGNHLVCDFPRLIKSSNEKYAPLGQYFGETKPSYFALVKGVEGITGVIMVICMVIA
FTLATRWFRRSLVKLPKPFDKLTGFNAFWYSHHLFIIVYLALIVHGQCLYLIHVWYRKTT
WMYLAVPVCLYVGERVLRFFRSGSYSVRLLKVAIYPGNVLTLQMSKPPAFRYKSGQYMFV
QCPAVSPFEWHPFSITSAPGDDYLSIHVRQLGDWTRELKRVFAAACEPPVGGKSGLLRAD
ETTKKTLPKLLIDGPYGSPAQDYSKYDVLLLVGLGIGATPFISILKDLLNNIIKMEEDED
ASTDLYPPVGPNKPHIDLGTLMTVTSKPKRVLRTTNAYFYWVTREQGSFDWFKGVMNEIA
ELDQRNIIEMHNYLTSVYEEGDARSVLITMLQALNHAKNGVDIVSGTKVRTHFARPNWKK
VLSKIASKHPYAKIGVFYCGAPVLAQELNKLCHEFNGKSTTKFEFHKEHF
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgaggggcggcgccgcccccgccgcggcgggcgcgggccaccaccagcgatggagcgcc
tcggcggggacgacgccgcggtcgctcagcacgggctcctcgccgcggggctccgaccgc
agctccgacgacggggaggagctggtcgaggtcacgctcgacctgcaggaggacgacacc
attatcctgcggagcgtcgagccggccgcggcggcggccggggcgtccaggctgccgctg
ggcgcgcgcggggaccatgcgggcggcggcggcgcgtcgtcgtcctcgcgctcgcggtcg
ccgtcgatcaggcggacctcgtcgcaccggctgctacagttctcgcaggagctcaaggcg
gaggccatgtccatcgcgcgccagttctcgcaggacctcaccaagcgcttcggccgcacc
cacagccgcgccgaaagccaggggcagcagccgacgtccggcatcgagtctgccctcgcc
gcacgggccgcgaggcggcagcgcgcgcagctcgaccgcacgcgctccggcgcgcacaag
gcgctccgcggcctccgcttcatcagcagcaacaaggccaacaacgcatggatggaggtg
caggccaacttcgaccgcctcgcctgcgacggcttcctctcccgcgccgacttcgcggaa
tgcatagggatgacggaatcgagggagttcgcgctcgagctgttcgacacattgagccgg
cggcggcagatgcaggtcgacaaaatcaacaaggaagagctgcgcgagatctggcagcag
atcacggataacagcttcgactcccgcctccagatcttttttgacatggtggataagaac
gcggacggtcggatcggagaggaggaggtgaaagagattatcatgttaagcgcatctgcc
aacaagttgtccaggcttaaggaacaagctgaagagtacgctgccctgatcatggaagag
cttgatcccgaaggacttggctacattgagctgtggcaattggagacacttcttttgcag
aaggatacctacatgaactacagtcaggcgctaagttacacaagccaagcgctaagccag
aacctagcaggcttaaggacaaagagtccaattcgcaaattaagaaccacattgagttac
tacttggaggataattggaaacgcctgtgggtgcttgcattgtggattgggataatggcc
ggactgttcacttggaagttcatgcagtatcgcaacaggtatgtgtttaatgtgatgggc
tactgcgtgacaactgcaaaaggtgctgctgaaaccctgaagctgaacatggcaattatc
ctcctaccagtctgccgcaacaccattacttggttgagaaatacaagggctgcacgggca
ttaccatttgatgataatataaatttccacaagactattgcagcggcaattgttgttggt
ataatcctccacgcagggaaccatcttgtatgtgattttccacggcttataaagtcgtca
aatgagaagtatgctcctctgggccagtattttggggaaacaaagccatcatattttgca
ttggtcaaaggagtggagggcatcaccggtgtaattatggttatctgcatggttatagct
ttcactttagcaacacggtggttccgccgaagcttggtgaagcttccaaaaccatttgac
aaactgactggctttaatgccttctggtactctcatcacttgttcattattgtgtatctg
gcgctcattgttcatggccagtgcctgtacctcattcatgtctggtacagaaaaacgaca
tggatgtatctggcggtgcctgtttgcttgtatgtaggggagagggtgctgaggttcttc
aggtctggcagttattctgtcaggttattgaaggtggccatatatcctggtaatgtcttg
acactgcaaatgtccaagcctcctgctttccggtacaagagtgggcaatatatgtttgtt
caatgtccagcagtgtcaccctttgaatggcatcctttctcaattacttcagcgcccgga
gatgattatctcagcattcacgttagacaacttggtgactggacacgagagctcaagagg
gtatttgcagcagcttgcgaacccccagtgggtggtaaaagtggccttcttagagcagac
gagacaaccaagaaaaccttaccaaagcttctgattgatggaccttatggctctcctgct
caggattacagcaagtatgatgttcttctacttgttggattaggaattggtgcaactcct
tttatcagcatattgaaagatctgcttaacaatatcatcaaaatggaggaagatgaggat
gcttccactgatctttatccaccagttggtccaaataagccgcacattgatctgggcaca
cttatgacagttacctcaaaaccaaagagggttctcaggaccacaaatgcttacttttat
tgggttacgcgtgagcaaggttctttcgattggttcaaaggagtcatgaatgagattgct
gaattggaccaaaggaatatcattgagatgcacaactacctcacgagtgtttatgaggaa
ggggatgctcggtcagtgctcatcaccatgcttcaagctctgaaccatgccaagaatggt
gttgacattgtctctggaactaaagtccggacacactttgcaagaccaaattggaaaaag
gtcctatctaaaattgcctccaagcatccatatgccaagataggtgtattctactgtgga
gctccagttcttgcacaagaactaaacaaactgtgccatgaattcaatgggaaaagcaca
acaaaattcgagttccacaaggagcatttctaa
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