Panicum virgatum (switchgrass): 120708403
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Entry
120708403 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120708403
KO
K16912
ribosomal biogenesis protein LAS1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120708403
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
120708403
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Las1
TMEM239
Motif
Other DBs
NCBI-GeneID:
120708403
NCBI-ProteinID:
XP_039849574
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Position
5K:complement(52042580..52046097)
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AA seq
602 aa
AA seq
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MAAAEAAPPPEASGFYAGAGGLSAGQKLVPWSSWAEWSFVRDGLFSPFPAAALRRIAAWR
SRGSVLIPVDVTAAFVEIRLRDPFFRSGLAGDDAMESEEMLAMLYSMAIMRLVNGFVDNQ
HKKTGRSISELAEAVGIPRVLVDIRHESSHRNLPSLRLLRLASIKAFDWLKCIYWDRQTN
SIPDVQVELRSRLHEISSFLKENDSKESKSGSKRKRSEKLIIKAIKYTRRLYYACPFEVV
SILLDHMQLDAPESPESSDMQEIHSLGVYQSSDTQISKSDMKTIIMKLSEKEPRLLLSVL
KSVIEMIEAKEELTNKGESYAFLPVGPSKVKRLCSLVLWLVTSIKELKVSGYIGLVHEIG
VLSSDKNAVPRFCLTKLLRKLLNLSTIGESCIIDAVLLLIEMVNSNSVKEKLRKLPVLSL
PRFAKISSLPQSRTICNEQGSLEKATETLEMFKLQLKRQKNACLTETGTTEGPFNTSTPE
KHNRWSVAKSWTPCPIGTILCSFSSCVVLPAFDVVDHELEVATLEQHGNFEEVDHSERFE
SQSDGLDDESILKISRSSPEYDISDMPELTTPLKDRLLVGGVWKKVSEEELLLLKSKMKL
LL
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggaggcggcgccgccgcccgaagcgagcggcttctatgctggtgccggc
ggcctctccgccggccagaagctggtgccgtggtcgagctgggcagagtggagcttcgtg
cgcgacggcctcttctcccccttccccgcagccgctcttcgcaggatcgctgcgtggcgg
agcaggggctccgtcctgatccccgtggacgttaccgcagccttcgtcgagatacggctg
cgggatcccttcttccggagcggattggctggtgatgatgccatggagtcggaggaaatg
ctcgcgatgctgtacagtatggcaatcatgaggcttgtaaatggttttgtggataatcaa
cataagaaaactggccgttcaatatctgaactagctgaggctgttggaataccacgagtt
ctggtggacattcgccatgaaagttcccatcgcaaccttccctccctgcgactgttacgc
ctggcaagtattaaggcatttgattggttgaagtgtatttattgggatcgccagactaat
tccattcctgatgttcaagtggaactgaggtcgagattgcatgagatttcttcctttctg
aaggagaatgattcaaaagaatcaaaatcaggttccaaaaggaaacggtctgagaaactg
attatcaaagccataaagtacactcgacggctatactatgcttgtccctttgaggttgtt
tctattctactggatcatatgcaactggatgctccagagtcccctgaaagcagtgacatg
caagaaattcatagtttgggtgtttatcagtcatctgacactcaaatatcaaaaagtgat
atgaaaactatcataatgaaactttcagagaaggaaccaagattgttgcttagtgtactg
aagtcagtaattgaaatgatcgaagccaaggaagagctcacaaacaaaggtgaatcttat
gcttttctaccagttggaccatctaaagtgaaaaggctatgttccttggttctatggctt
gtcacgagcataaaagagcttaaggtttcaggctacattgggcttgttcatgagatagga
gtactttcttcagacaagaatgcagttcctcgtttttgcctcacaaaacttctacggaag
ttactgaatctatccactataggtgaaagttgtatcatagatgcagtgctgctgttgatt
gagatggtcaacagtaacagtgtgaaggagaaattgaggaaacttcctgtgttatctttg
cctaggtttgctaaaatttcttccctcccacaatcaagaaccatatgcaacgaacaggga
tcacttgaaaaggcaacagagacactggaaatgttcaagttgcagttgaagaggcagaag
aatgcatgcttaacggaaactggcaccactgaaggaccattcaacacaagcacaccagag
aaacataatagatggtctgtagcaaagtcatggactccctgtccaataggaacaatactc
tgctcatttagttcatgtgttgttcttcctgcctttgatgttgtggatcatgaactggag
gttgccacactagaacagcatggaaattttgaggaggttgatcattctgaaaggtttgaa
tcccagtctgatgggttggatgatgaaagcattctgaaaatatcaagatcatcaccagaa
tatgatatttcagatatgccagaattgaccactcctttgaaggatagattactggttggt
ggtgtttggaaaaaggtgtccgaagaggagttactcttgttaaaatcaaagatgaaattg
ttgttgtaa
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