Panicum virgatum (switchgrass): 120712260
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Entry
120712260 CDS
T07260
Name
(RefSeq) histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH6-like
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
Pre-SET
SET
Motif
Other DBs
NCBI-GeneID:
120712260
NCBI-ProteinID:
XP_039853951
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Position
6K:33342816..33346316
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AA seq
1081 aa
AA seq
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MDSYAARPLDDNAARPRPSPLADGLPPPRWPPAPRPRGGGDARRGGGLAERGVAAPGAAA
ASGGNAAGVAGELVGEAAAGVAASGVAREEEMGGGAEAGTKRRLPLAPARPPPKRTAVSA
RRQFPSGCGRLATASLAGAGAGAGSRSGDAGARSCSGVLESKDGALLGAATHSATCSSAL
EKVSAAVADGPVPGCGHHVPEAGAVKSSSEALRRGDVAAPDGSLDIGSQGVPAVSVEGRG
NGAGSGELRRKELVPAAPLQAESMVSFAKRSSPLGCGRDAVLSVLVGGGIGLESGAADGD
LSVAEIVPSQPNGTIDGTVQDGGLEEGEIAPEVVVQESQVSTGDTLQNSSACTHGPSTDF
RAAETSAMQPSNEKTDGNTLPCEKKGSSWLVAKDVEVMNQSIGSSSNIVAESLAADSSKQ
NMIGKRVSNSARMKIMHTSPRLAKNLHKEETEQGRPDRIKDTAELTTDQVMQAHTSSSDK
FLMTQEKEAATSRGFFGPRKKVKVKTPAHLRMKIASARALGSKGKLNDEVASNLDDDDIL
KALVVHEGKLELYLKNSSGLTSARCQQHGSQNADARSKFKMLCRRFEFVCRALVQAVEQR
SLKIRRIDLEADKVIRNLPGFIKHDAIVGQVPGVEVGDEFLYRVQLAIVGLHRVYQGGID
TTTHRNGERIAISIVASVGYPDELPCSGELIYTGSGGKPARKNYVEDQKLEGGNLALKNC
IKTKTPVRVIYGFKRQNTEGGSHSRAKQISTFTYDGLYRVVDFWMHGRPGSRVFKYKLRK
IPGQSELPMHIAKGVRKSKTRPGLCMVDISQGKEGTPICVINTVDDVQPTPFRYITRIKY
PSGLTKIRQHGCDCTNGCSDSASCACAVKNGGEIPFNSNGAIVNEKPLIFECGPSCKCPP
SCQNRVSQHGMKIPLEVFRTTKTGWGVRSLRSITSGSFICEHVGELYGKEADKRRNSDYL
FDVGLNCGDGLLSTVSGPNTSSSCSGIMEDVGFTVDAAEYGNIGRFINHSCSPNLYAQNV
IWDHDDKRVPHIMFFAAETIPPLQELTYDYNYEIDHVQEANGRIKFKVCQCGSPQCSGRL
Y
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atggactcctacgcggcgaggccgctcgacgacaacgccgcgcggccgcggccgtccccg
ctcgccgacggccttcctcctccgcgctggcctcctgctcctcgtccacgcggcggcggg
gacgcgcggcgcggcggcggccttgcggagcgcggggtcgctgcaccgggcgcggccgcg
gcttccggagggaatgcggcgggcgtcgcaggcgagctggtcggcgaggctgcggctggg
gtcgccgcttctggtgtggcgcgggaggaggagatgggaggcggcgccgaggcggggacc
aagaggcgcttgccgctggctcccgcgcgcccgccgcccaagcggacggcggtctccgcg
aggcgtcagttcccgtctggttgcgggcgactcgcgactgcttcgctcgccggcgccggc
gccggcgccggttcacgaagcggagatgctggtgcccgcagctgttctggtgtactggaa
agcaaggacggtgctctgttgggggcggcgactcacagtgctacatgttcgagtgcgctg
gagaaggtgtctgcagcggtcgctgatggcccagtgccgggctgcggccatcatgttcca
gaggcaggtgcggtgaaatcttcatcagaggctctgcgccggggtgatgtggctgcccca
gatggttcgttggacatcggttcccaaggcgttcctgctgtttcagtggagggcagggga
aacggagcagggagtggtgaattgcggaggaaggagttagtgccagctgcgcctttgcaa
gcagagtcgatggtctctttcgccaaacgcagctccccccttggttgcgggagggacgca
gtgttatctgttcttgttgggggaggcatcggattggaatctggtgctgctgatggtgat
ttgagtgtggcagaaattgtgccttcacaacccaatggtactattgatggaacagtacag
gatggtggactggaggagggtgagattgctcccgaggttgtggttcaagaatctcaagtt
tctaccggcgatactctgcaaaattcttcagcttgtacacatggaccttctacagatttt
cgtgctgctgaaacttctgcgatgcagccttctaacgagaagactgatgggaacacattg
ccgtgtgagaagaagggatcgtcatggttagttgcaaaagatgtcgaggtgatgaaccaa
tccattgggagttcaagcaatattgttgctgaatctttggctgcagattcgtccaaacaa
aatatgattggcaagagagtgtctaacagtgctaggatgaagatcatgcatacatctccg
agacttgcaaaaaatctgcacaaggaggagacagaacagggaaggcctgataggattaag
gatactgctgagcttactacagatcaagttatgcaagctcacacgtcttcttcagacaag
ttcctcatgacacaggaaaaggaggccgctacatctaggggcttctttggtcctaggaag
aaggtgaaggtaaaaactccagctcatctacggatgaagattgcctctgcacgtgcattg
ggtagcaaggggaaactgaacgacgaggtggcttccaacttggatgatgatgacatattg
aaggcactagttgttcatgaaggaaagcttgaactatacctcaagaattcatcaggtctt
acttctgccaggtgtcagcaacatggatcccagaatgcagatgctaggagcaaattcaag
atgttgtgcagaaggtttgagtttgtatgccgagctctagtgcaagctgtggagcagcgt
tcactgaagattaggagaattgaccttgaagctgacaaggtgataagaaatttaccgggt
tttatcaaacatgatgctattgtgggacaagtccctggagttgaagttggtgatgagttt
ctatacagagttcagcttgccattgttggtctacatcgtgtataccagggaggcattgac
accacaacacatagaaatggcgagcgcattgcaataagcattgttgcttctgtaggttat
ccagatgagttgccttgctcaggtgaattaatatacactggttctggtggaaagcctgct
cgtaagaactatgttgaagatcagaagcttgaggggggcaatcttgcattaaaaaactgt
atcaaaacaaaaactccagtcagggtgatttatggctttaagaggcagaataccgaggga
ggcagccattccagggccaaacaaatctcaacatttacttatgatggactgtatcgggtg
gtggatttctggatgcatggtcggccgggttcaagggtgtttaaatacaagttgcgaaag
attcctggacagtcagaattgccaatgcacatagctaaaggggtaaggaagtccaaaacg
cgtccaggcctgtgcatggttgatatatctcaagggaaggagggaactcccatctgtgtc
attaatacagttgatgatgtgcaacccacaccgttccgatacatcaccagaattaaatat
ccatcggggcttacaaaaatacgccaacacggttgtgactgcaccaacggatgctcagac
tctgcgagctgtgcgtgtgctgtgaagaatggaggggaaatcccatttaactcaaatggt
gcaattgtcaatgaaaagcccctgatatttgagtgtggtccatcttgtaaatgccctcct
tcatgccagaacagggtcagtcagcatggtatgaaaataccactggaagtattcaggaca
accaagacaggttggggtgtaagatccttaaggtccatcacttctggcagcttcatatgt
gagcatgttggtgagctgtatggcaaggaagctgacaagagaaggaacagtgattacttg
tttgatgtaggccttaactgtggtgatggattgctatcaactgtttcgggtccgaacact
tctagctcctgctctgggatcatggaagatgtgggcttcacggtagatgcagctgagtat
ggaaatattggaagattcatcaaccacagctgttcacctaatctttacgcacaaaatgtt
atttgggaccatgatgacaaaagggtgcctcatattatgttctttgctgcggagacaatt
ccaccgctacaggagctcacttatgactacaactacgaaatagatcatgtccaagaagcg
aatggaaggataaaattcaaagtttgtcaatgcggttctccacaatgctctgggaggcta
tactaa
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