Prionailurus viverrinus (fishing cat): 125154480
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Entry
125154480 CDS
T09889
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pviv03016
]
125154480
Enzymes [BR:
pviv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
125154480
Transfer RNA biogenesis [BR:
pviv03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
125154480
BRITE hierarchy
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
125154480
NCBI-ProteinID:
XP_047694794
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All DBs
Position
E3:complement(15497097..15710018)
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AA seq
677 aa
AA seq
DB search
MDPSLDTWDFSSPLISLWINRLYIYLGFAFGISLWICFQIVIRKQLFIFKGKNSKDKSVP
KATRDLMTNGYISLQKKDILVSGVKIFYGSQTGTAKGFAASLAEAVTSLGLPVAVINLQE
YDPDDHLVEEVTSKNVCAFVVATYTDGLPTESAEWFCKWLEEASSDFRFGKTYLKGMRYA
VFGLGNSAYANHFNKVGKNVDKWLWMLGAHRVVARGEGDCDVVKSKHGSIEADFRVWKTR
FISRLQALRKGERKPCGGTCKKGQCESSAEEEPFESTSEEESGTEDHQNLNSVVDVEDLG
KIMNCVKKEKREKEHQEEKSTLVRNAVKGEASERRAMITPALREALTKQGYQLIGSHSGV
KLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWK
MDQPEMILKEAIENHQSMIKQFKGVPGVREDRFEEGMMVKHCALSLVGEPIMYPEINRFL
KLLHECKISSFLVTNAQFPVELRNLKPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFLN
SLKALAAKGVTYCGESSASSLTMANVPWHEEVVHFVHELVALIPNYEIACEHEHSNCLLI
AHTRFKIDGEWWTWIDYNRFQELVQEYEDSGGLTNFSAKDYVAKTPLWALFGASERGFDP
KDTRYQRKNKSKDISGC
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctttggatacatgggacttctcttcacctttaatatcattatggataaac
aggctttacatatatttgggctttgcctttggcattagcctttggatttgtttccagatt
gtcatcaggaagcagttgtttatcttcaagggcaagaactcaaaggataaatctgttcca
aaagcaactcgggatttgatgacaaatggttatatctctcttcaaaagaaggacatctta
gtgtctggagtgaagattttctatggttcccagactggaacagcgaagggatttgcagca
agtcttgctgaagcagttacctccctaggtctgcctgtggcagttattaatctccaagaa
tacgatccagatgatcatctagtagaagaggttactagtaaaaacgtttgtgccttcgtg
gttgctacgtatactgatggtctacccactgaaagtgcagagtggttctgcaaatggtta
gaggaggcatccagtgatttccgatttggcaaaacttacctgaagggtatgagatatgct
gtatttggcctgggaaattctgcctatgcgaaccacttcaacaaggttggcaagaatgtc
gataagtggctctggatgcttggtgctcaccgtgtggtggctagaggggagggtgactgt
gacgtggttaaaagcaaacatggcagcattgaagccgacttcagagtttggaagaccagg
ttcatctcccggctacaggcacttcggaaaggagagagaaaaccctgtggcggcacctgc
aagaaaggccagtgtgaatcatctgcggaggaagagccctttgagagcaccagtgaggaa
gagtctggtactgaggaccaccagaatctaaattctgtcgttgatgtcgaggaccttggc
aaaattatgaattgtgtgaagaaagaaaagagagagaaggagcaccaggaggagaaaagc
actctggtcaggaacgccgtgaagggtgaagccagtgaaagaagggctatgataacccct
gctctccgagaagcccttactaaacaaggttatcagttgattgggagccattctggggtg
aagctttgcagatggacaaagtcgatgctccgagggagaggaggttgctacaaacataca
ttttatggtatcgaaagccatcgttgcatggaaactaccccaagcttggcatgtgcaaat
aaatgtgtcttctgttggcggcaccacaccaacccagtgggcactgaatggaggtggaag
atggaccagcctgaaatgatcttaaaggaagccattgaaaaccatcagagcatgatcaag
cagtttaaaggagtcccaggtgtcagagaagatcgttttgaagaagggatgatggtaaag
cactgtgccttgtcccttgtgggagaacccatcatgtacccagaaatcaataggtttttg
aaattactccatgagtgtaaaatctccagtttcctggtcacaaatgcacaattccctgtg
gaactcaggaacctcaaaccagtcacacagctgtatgtcagtgtggatgctagcaccaaa
gatagcctgaagaaaattgaccgcccactcttcaaggatttctggcagagattcctcaac
agcttaaaagccttggcagcaaagggtgtcacctactgtggagagagttcagcaagcagt
ctcaccatggccaacgtgccctggcacgaggaggtggtacactttgtccacgagttggtg
gctctcatccccaactatgaaattgcttgtgaacatgaacactccaactgcctcctgata
gctcacacaaggttcaagattgatggcgaatggtggacatggattgattataaccggttc
caggagctcgtgcaggaatatgaagatagcggtggattaacaaatttcagcgcaaaggat
tatgtggccaaaacccccctctgggcgttatttggtgccagtgaaagaggctttgatccc
aaggacacaagataccagagaaagaacaaatccaaggatatttccgggtgttga
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