Prionailurus viverrinus (fishing cat): 125156268
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Entry
125156268 CDS
T09889
Symbol
CHD7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7 isoform X1
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
pviv
Prionailurus viverrinus (fishing cat)
Brite
KEGG Orthology (KO) [BR:
pviv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pviv03036
]
125156268 (CHD7)
Chromosome and associated proteins [BR:
pviv03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
125156268 (CHD7)
BRITE hierarchy
Motif
Pfam:
SNF2-rel_dom
BRK
Helicase_C
Chromo
ResIII
DEAD
CHDCT2
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
125156268
NCBI-ProteinID:
XP_047698026
LinkDB
All DBs
Position
F2:12043278..12234408
Genome browser
AA seq
3002 aa
AA seq
DB search
MADPGMMSLFGEDGNIFSEGLEGLGECGYPENPVNPMGQQMPIDQGFASLQPSLHHPPAN
QNQTKLTHFDHYNQYEQQKMHLLDQPNRMMSGAPGNGLASPHSQYHAPPVPQVPHGASGG
GQMGVYPGMQNERHGPPFVDSGSLWGPRAVQVPDQARAPYQQQPQPQQPQPAPSGPPAQG
HPQHMQQMGSYMARGDFSLQQHGQPQQRMSQFSQGQEGLSQGSPFIATSGPGHLAHVPQQ
SPSVAPSLRHSVQQFHHHPPTALHGESVAHSPRFSPNPPQQGAGRPQTLNFSSRSQTVPS
PTINNSGQYSRYPYSNLNQGLVNNTGMNQNLGLTNNTPMNQSVPRYPNAVGFPSNSGQGL
MHQQPIHPSGSLNQMNTQTMHPSQPQGTYASPPPMSPMKAMSNPAGTPPPQVRPGSAGIP
MDVGSYPNMPHPQPSHQPPGAMGIGQRNMGPRNMQQSRPFMGMSSAPRELAGHMRPNGCP
GVGLADPQAIQERLLPGQQHPGQQPSFQQLPTCPPMQPHPGLHHQSSPPHPHHQPWAQLH
PSPQSTPQKVPVPQHSPSEPFLEKPVPDMTQVSGPNAQLVKSDDCLPSVEQQPQQKKKKK
KNNHIVAEDPSKSFGKDDFPGGADNQELNRNSLDGSQEEKKKKKRPKVKKDPKEPKEPKE
KKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSSKKSSNKKPDSEASALKKKVNKGKTEG
SENSDLDKTPPASPPPEEDEDPGVQKRRSSRQVKRKRYTEDLEFKISDEEADDADAAGRD
SPSNTSQSEQQESVDAEGPVVEKIMSSRSIKKQKDSGEEIEVEEFYVKYKNFSYLHCQWA
SVEDLEKDKRIQQKIKRFKAKQGQNKFLSEIEDELFNPDYVEVDRIMDFARSTDERGEPV
THYLVKWCSLPYEDSTWELRQDIDQAKIEEFEKLMSREPETERVERPPADDWKKSESSRE
YKNNNKLREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLKGIHGPFLV
IAPLSTIPNWEREFRTWTELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAII
TTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTV
EELFSLLHFLEPSRFPSETTFMQEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKNLAPK
EETIIEVELTNIQKKYYRAILEKNFTFLSKGGGQANVPNLLNTMMELRKCCNHPYLINGA
EEKILEEFKETHNADSPDFQLQAMIQAAGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDI
LEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTC
IIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLGLDKAVLQS
MSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILLRRTHTITIE
SEGKGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAELDIDALNGRNNLVIDTPRVRKQ
TRLYSAVKEDELMEFSDLESDSEEKPCTKPRRPQDRSQGYARSECFRVEKNLLVYGWGRW
TDILSHGRYKRQLTEQDVETICRAILVYCLNHYKGDENIKSFIWDLITPTADGQTRALVN
HSGLSAPVPRGRKGKKVKAQSTHPVVQDADWLAGCNPDALFQEDSYKKHLKHHCNKVLLR
VRMLYYLRQEVIGDQADKILEGADSSEADVWIPEPFHAEVPTDWWDKEADKSLLIGVFKH
GYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGTDMLADGGDGGEFDREDEDPEYKPTR
TPFKDEIDEFANSPPEDKEESMEIRSTGKHSESNAELGQLYWPNTSTLTTRLRRLITAYQ
RSYKRQQMRQEALMKTDRRRRRPREEVRALEAEREAIISEKRQKWTRREEADFYRVVSTF
GVIFDPMKQQFDWNQFRAFARLDKKSDESLEKYFSCFVAMCRRVCRMPTKPDDEPPDLSS
MIEPITEERASRTLYRIELLRKIREQVLHHPQLGERLKLCQPSLDLPEWWECGRHDRDLL
VGAAKHGVSRTDYHILNDPELSFLDAHKNFAQNRGAGNLSSLTPLAVGFGQTPAVLPSAH
AQEEKAAGQSEGKAEESGGVTTQEKPEGKEEEEETDGREKDSKQGCEAEASSVKSDLKGM
EVGADTGPKSISEKGSEEDEEEKLEDDDKSEESSQPEAGAVSRGKNFDEESNASMSTARD
ETRDGFYMEDGDPSVAQLLHERTFAFSFWPKDRVMINRLDNICEAVLKGKWPVNRRQMFD
FQGLIPGYTPPTMDSPLQKRSFAELSLVGQASISGSEDLTTSPQLSKEDALNLSVPRQRR
RRRRKIEIEAERAAKRRNLMEMVAQLRESQVVSENGQEKVVDLSKASREAASSTSNFSSL
TSKFILPNVSTPVSDAFKTQMELLQAGLSRTPTRHLLNGSLVDGEPPMKRRRGRRKNVEG
LDLLFMSHKRTSLSAEDAEVTKAFEEDIETPPTRNIPSPGQLDPDTRIPVINLEDGTRLV
GEDAPKNKDLVEWLKLHPTYTVDMPSYVPKNADVLFSSFQKPKQKRHRCRNPNKLDINTL
TGEERVPVVNKRNGKKMGGAMAPPMKDLPRWLEENPEFAVAPDWTEIVKQSGFVPESMFD
RLLTGPVVRGEGASRRGRRPKSEIARAAAAAAAASTSGINPLLVNSLFAGMDLTSLQNLQ
NLQSLQLAGLMGFPPGLATAAAAAGGDAKNPAAVLPLMLPGMAGLPNVFGLGGLLNNPLS
AAAGNAAAAAAAAAAPGQGEPEDGAPKAEEKGNENEDENKDSEKSTDAVSATDSANGSVG
AATAPAGLPSNPLAFNPFLLSTVAPGLFYPSMFLPPGLGGLTLPGFPALAGLQNAVGSSE
EKAPDKAEGGAFQEEENLDGSDAEENPEKTAGSSVFEDEGAQGEELDSLDGGDELENNEN
DE
NT seq
9009 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccaggaatgatgagtctttttggcgaggacgggaatattttcagcgaaggc
ctcgagggcctcggagagtgtggttaccctgaaaacccagtgaaccccatgggtcagcag
atgccgatagaccaaggctttgcctccctgcagccctccctgcaccacccccccgcgaat
cagaatcagaccaagctgacccacttcgatcactataatcagtacgaacagcaaaagatg
catctgctggatcagccaaaccgaatgatgagcggcgcccctgggaacgggctcgcgtcc
cctcactcgcagtaccacgcccctcccgtccctcaggtcccccacggcgccagcggtggc
ggtcagatgggagtctaccccggcatgcagaacgaaaggcacgggccgccgttcgtggac
agcggctccctgtggggcccccgggccgttcaggtgccggaccaggcgcgggccccctac
cagcagcagccccagccgcagcagccccagcccgctccgtcggggccccccgcgcagggc
caccctcagcacatgcagcagatgggcagctatatggcacgcggggacttctccctgcag
cagcacggccagccgcagcagaggatgagccagttctcccagggccaggagggcctcagt
cagggaagtcctttcatcgccacctcaggacccggccacttggcccacgtgccccagcag
agccccagcgtggcaccttccttgcgtcattcggtgcagcagttccaccaccacccccct
actgctctccatggagaatccgttgcccacagccccaggttctcccctaatcctcctcaa
caaggggctgggaggccgcagaccctgaacttcagttctcggagccagaccgtcccctca
cctactataaacaactcagggcagtattctcgatatccttacagtaacctaaatcaggga
ttagttaacaatacagggatgaatcagaatttaggccttacaaataatactccaatgaat
cagtccgtaccaagataccccaatgctgtaggattcccatcgaacagtgggcaaggacta
atgcaccagcagcccatccaccccagcggctcacttaaccaaatgaacacacaaactatg
catccttcacagcctcagggaacttacgcctctccacctcccatgtcacccatgaaagca
atgagcaatccggcaggcacaccgcctccgcaagtcaggcccggaagcgctgggatacca
atggacgttggcagttatccaaatatgccccaccctcagccatctcaccagccccccggt
gccatgggaatcggacagaggaatatgggccccagaaacatgcagcagtctcgtccgttt
atgggcatgtcctcagcaccgagggagctggccgggcacatgagaccaaacggctgtccc
ggcgttggccttgcagatccccaagcgatccaggagcgactgctccctggccagcagcac
cccggtcagcagccgtctttccagcagttgccaacctgccctccgatgcagccccacccg
ggcctgcaccaccagtcttcacccccacacccgcaccaccagccttgggcacagctccac
ccgtcaccccagagcaccccgcagaaagtgcctgtgcctcagcattctccatcggagccc
tttctagagaaaccagtgccggatatgactcaggttagtggaccgaacgctcagctagtg
aagagtgatgattgcctgccatcagtggaacagcagccacagcagaagaagaagaagaag
aaaaacaaccacattgtcgccgaggatcccagtaaaagttttgggaaagatgacttccct
ggtggggctgataaccaagaactaaacaggaactcactagatgggtcccaagaagagaag
aagaaaaagaaaaggccgaaggtaaaaaaagatccgaaggaaccgaaagaacccaaggag
aaaaaagagcccaaggaacccaagaccccgaaagcccctaagattcccaaagagccaaag
gaaaagaaagcaaaaactgccacgccaaaacccaaatccagcaaaaagtcaagtaataag
aaacctgattcagaagcaagtgctttgaagaaaaaggtcaacaagggaaaaacagaaggt
tctgaaaattcagacttagacaaaacgcccccagcatctcctcctcctgaagaagatgag
gacccaggtgttcagaagcgacgttccagcaggcaggtgaagcggaagcgatacacggaa
gacttggagttcaagatttccgacgaggaagcagatgatgcagacgctgctgggagagac
tccccctccaacacctcgcagtcagagcagcaggaatctgttgatgcagaaggtccagtg
gtagaaaaaatcatgagcagtcgttcaataaaaaaacagaaggactctggagaggagata
gaagttgaggaattctacgtgaaatacaaaaacttctcttatcttcattgtcaatgggca
tctgtagaagatctggagaaagataagagaattcagcaaaagatcaaacgatttaaggca
aagcagggccagaacaaattcctttcagagattgaagatgagctttttaatccagattat
gtggaggttgaccggataatggactttgcacgaagcacagatgaacggggagagcctgtg
actcactacctggtgaagtggtgttccctgccttatgaagacagcacgtgggaactaagg
caggacatagatcaagcaaagatcgaagagtttgagaaactaatgtccagggagccagaa
acagagcgtgtggagcgacctcctgctgatgactggaagaaatcggagagttccagggag
tataaaaacaataacaaactcagggaataccagttggagggagtaaactggctacttttc
aattggtacaacatgcgaaactgcattttagcagatgaaatgggtttgggaaagactatc
cagtccattacatttctctatgagatatatttgaaaggaatccatggcccttttttagta
attgccccattgtccacaatccccaactgggaaagggaattccgtacctggacagagttg
aacgtggttgtgtatcatgggagtcaagctagtcgtcggaccattcagttgtatgaaatg
tacttcaaagatccccagggtcgagtgataaaggggtcctataagtttcatgccatcatc
actacatttgagatgattttgacggattgtcctgagctgcggaatattccatggcgctgt
gtcgtcattgatgaagcccacaggctgaagaataggaactgcaagcttctggaggggctc
aagatgatggacttggagcacaaagtgctgctgacggggacccccctacagaacacggtg
gaggaactcttcagcctgcttcatttcttggaaccgagtcgtttcccttcagaaaccacc
ttcatgcaagaatttggcgatctgaaaacagaagaacaggtgcaaaaactccaggctatt
ctcaagccaatgatgttgagacgtctcaaggaggatgtagaaaagaacttggcccccaaa
gaagaaaccattattgaagttgagctcacgaacattcagaagaaatattaccgagccatc
cttgagaagaatttcacatttctctccaaaggtggtggtcaagctaacgtacctaacctt
ttaaacactatgatggagctacggaagtgctgcaatcacccataccttattaacggtgct
gaagagaaaattttggaagagtttaaagaaacacacaatgcagactctccagattttcag
ctccaggcgatgatccaggctgctggcaagctagtgctgattgacaaactactgccaaaa
ctgaaggctggtggccacagggtgcttatcttttcccagatggtgcgctgcttggacata
ctggaagactacctcattcaaagacggtacccatacgagaggatcgacggcagagtgaga
ggcaacctccgccaggcagctatcgacagattctccaaacccgattctgataggtttgtt
ttcctcctgtgtacacgggcaggaggcttaggcattaatcttactgctgctgatacctgc
atcatcttcgattccgactggaatccccaaaatgatctccaggctcaggctagatgtcat
agaataggacagagcaaatctgtgaaaatctacaggctgatcacaagaaactcttacgaa
agggaaatgtttgacaaggctagtctgaagctcggcctggacaaagctgtgctgcagtcc
atgagtgggagagaaaacgctaccaacggggtccaacaactttccaagaaagaaatagag
gatcttctgcgaaagggggcctacggtgcactcatggatgaggaggatgaagggtctaag
ttctgcgaagaagatattgaccagattctcctgcggcgaacccacactatcaccattgag
tctgaaggcaaaggttccacgtttgctaaggccagttttgttgcatctggaaacaggaca
gacatttccttggatgatccaaatttctggcaaaagtgggctaagaaggctgaattggat
attgatgccttaaacgggaggaacaacctggttattgacactccaagagtgaggaagcaa
accaggctgtacagtgcagtgaaagaagacgagctgatggagttttcagacttggaaagt
gattccgaagagaagccttgcacgaagccgcggcggccccaggacaggtcccagggctac
gcgaggagtgagtgctttagagttgagaagaatctgctcgtctatggctggggacggtgg
acagatatcctttcgcacggacgctacaagcgtcagctcaccgagcaagacgtggaaacc
atctgcagggccatcctcgtgtactgcctcaatcattacaagggggatgagaatatcaaa
agcttcatctgggatttgatcacgcccacggcggacggccagacgcgagccttggtcaac
cattctggtttatcggccccggtgcccaggggaaggaaaggaaagaaggtgaaagcccag
agcacccatccagtggtgcaggatgccgactggctggcgggttgcaacccggatgccttg
ttccaggaggacagctacaagaaacacctgaagcaccactgcaataaggtcctgctgcgt
gtccgcatgctgtactacctaagacaagaagttataggagaccaggcagataagatttta
gagggtgctgactcaagtgaggctgatgtgtggatccctgaacccttccatgcggaagtc
cccacagattggtgggataaggaagcagataagtccctcctaattggagtgttcaaacac
ggctacgagaagtacaattccatgcgagctgaccccgcactgtgcttcctggaacgagtc
gggatgcccgatgccaaggccatagctgccgagcaaagaggaacagacatgctagcagat
ggcggtgacgggggagaatttgatagagaagatgaagacccggaatataaaccaaccagg
actccattcaaggatgaaatagatgaatttgcaaattctcctccagaagataaggaagaa
tccatggagatccgctccacaggcaagcacagcgagagtaatgctgagttaggccaactt
tactggcccaacacctcgaccctgaccacccgtctgcgccggctcattactgcctatcag
cgcagctataaaaggcaacaaatgaggcaagaggctctaatgaagactgaccggcggaga
cggcggcctcgggaggaagtgagagcactagaagcggaaagggaagctataatatctgag
aaacggcaaaagtggacaagaagagaagaggctgatttttaccgtgtggtatccactttt
ggagttatttttgaccccatgaaacagcagtttgactggaaccaatttcgagcctttgcc
agacttgacaaaaagtctgacgagagtttggagaaatacttcagttgttttgtggccatg
tgtaggcgagtgtgtcgaatgcccactaagccagatgatgaaccacctgacctctcctcc
atgattgagccaatcacagaagagcgtgcctctagaactctctaccgcatcgaactgctg
cggaaaatacgcgagcaggttcttcatcaccctcagctgggagagaggctgaagctctgc
cagccgagtttggatttgccagagtggtgggaatgtgggaggcatgaccgggacttgctg
gtcggcgctgctaaacacggggtcagccggacggattatcacatcctcaatgaccccgag
ttatctttcttggatgcgcacaaaaactttgcccagaaccgaggggcaggtaacctgtcc
tccctgactccactggccgttggatttggccagactcctgccgtcctcccgtctgctcac
gcccaggaagagaaggctgcgggacaaagcgagggcaaagcggaggagtctggcggcgtg
accacccaagagaaacccgaggggaaggaggaggaagaagagaccgacggcagggagaag
gacagtaagcagggctgtgaggccgaggcgagctctgtgaaaagtgacctgaaagggatg
gaggtcggtgccgacacagggcccaagtctatttcggaaaaaggttctgaagaggacgaa
gaagaaaagctggaggatgatgataagtcggaagagtcttcccagcctgaagcaggagct
gtctctagagggaagaatttcgatgaagaaagcaatgcctccatgagcaccgctagggat
gaaacccgagatgggttctacatggaggatggagacccttcagtagctcagctccttcat
gagagaacatttgccttctcattttggcctaaggaccgagtaatgataaaccgattagac
aacatctgtgaagccgtgctgaaaggcaaatggccagtaaatcggcgccagatgtttgat
ttccagggcctcatccctggttacacgccacccaccatggacagtcccctgcagaagagg
agctttgccgagctctccttggtcggccaagctagcattagtgggagcgaggacctcacg
acttctcctcagttgtcaaaggaagacgccctaaacctctctgtccctcgccagcggagg
aggaggaggagaaaaattgaaattgaggccgagagagcggccaagcggcgaaacctcatg
gaaatggttgctcagctgagggagtctcaagtggtctcagaaaacggacaagaaaaagtt
gtagatttatcaaaggcctcaagagaggcagcaagctctacctcaaatttttcgtctctt
acttcaaagtttatcttgcctaatgtctcgacaccggtgtctgatgcctttaagactcaa
atggagctgctccaggcaggcctgtcacgcacacccacgaggcatctgcttaacggctcc
ctggtggatggagagcctcccatgaagaggaggcggggaaggaggaaaaacgtggagggt
cttgatctgcttttcatgagccacaaacggacgtcattgagtgcagaggatgctgaggtg
accaaagctttcgaagaagatatagagaccccacctacaagaaacattccttctcctgga
cagctggacccagacacgcggatccccgtgataaatcttgaagacgggactaggctggtg
ggggaggacgctcctaaaaataaggacttagttgaatggctgaagctgcatcctacttac
actgttgatatgccaagttatgtaccaaagaatgcggatgtgctgttttcctcatttcag
aaaccgaaacagaaacgacatagatgtcgaaaccctaataaattggatataaacactttg
acaggagaagaaagggtgcctgttgtcaataaacgaaatggaaagaagatgggtggagct
atggcgcctccgatgaaggacctgcccaggtggctggaagagaaccctgaatttgcagtc
gctccagactggactgagatagtgaagcagtctggttttgttcccgagtcgatgtttgac
cgccttctcaccggccccgtggtgcggggggaaggagcgagcaggagaggacgaaggccc
aagagcgagatcgccagggcggccgcggcggccgcggcggcctccacttccggaatcaac
cccctgttggtgaacagcctgtttgccgggatggacctcacgagccttcagaacctccag
aacctccagtctctccagctcgcggggctcatgggcttccctccaggactggcgacggcg
gccgccgccgccggaggcgacgccaagaaccctgcggccgtgctgcccctgatgctgccg
ggcatggcgggcctgcccaacgtgttcggactgggcgggctgctgaacaacccgctctcc
gctgctgctggcaacgccgccgccgcggccgccgccgccgccgctcccgggcagggagag
ccggaagacggcgccccgaaagcggaagagaaaggcaacgagaacgaagacgagaacaaa
gactccgagaaaagcacagatgctgtttcggctactgactctgcgaatggatctgttggt
gctgctactgccccggccggactgccctccaacccgctcgccttcaaccctttcctcctg
tccaccgtggcgccgggcctcttctacccgtccatgtttctacctccgggactgggggga
ttgacactgcctgggttccccgcgttagcaggactccagaacgccgtgggctccagcgaa
gagaaggcccccgacaaggccgaggggggcgccttccaggaagaggagaacctggacggc
agcgacgccgaggagaacccggaaaagaccgcggggtcctccgtcttcgaagacgaagga
gcacagggtgaagagctggactcgctcgatgggggggatgaactagaaaacaacgaaaat
gatgaataa
DBGET
integrated database retrieval system
